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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094947   COP9 signalosome complex subunit 2 
 ppo-r.4   18094947   COP9 signalosome complex subunit 2 
 ppo-u.5   7488179   COP9 signalosome complex subunit 2 
 gma-u.5   100818784   COP9 signalosome complex subunit 2 
 gma-u.5   100788070   COP9 signalosome complex subunit 2 
 gma-u.5   100787019   COP9 signalosome complex subunit 2 
 mtr-u.5   11443010   COP9 signalosome complex subunit 2 
 ath-u.5   FUS12   proteasome family protein 
 vvi-u.5   100256855   COP9 signalosome complex subunit 2 
 sly-u.5   101258397   COP9 signalosome complex subunit 2 
 sly-u.5   101253844   COP9 signalosome complex subunit 2 
 sly-u.5   101258618   COP9 signalosome complex subunit 2 
 osa-u.5   4326902   COP9 signalosome complex subunit 2 
 zma-u.5   103634653   COP9 signalosome complex subunit 2 
 zma-u.5   100283498   COP9 signalosome complex subunit 2 

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Top 50 coexpressed genes to 18094947 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094947 (ppo-u.5 coexpression data)

CoexMap"18094947"


ppoLOC18094947 | Entrez gene ID : 18094947    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 3 1 1 1 3 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000338 [list] [network] protein deneddylation  (7 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (16 genes)  IEA  
GO MF
Protein XP_006369419.1 [sequence] [blastp]
XP_024449718.1 [sequence] [blastp]
XP_052303176.1 [sequence] [blastp]
XP_052303177.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_006369419.1)
cyto 6,  nucl 4  (predict for XP_024449718.1)
cyto 6,  plas 1,  golg_plas 1,  chlo 1,  nucl 1,  mito 1,  pero 1,  chlo_mito 1  (predict for XP_052303176.1)
cyto 6,  plas 1,  golg_plas 1,  chlo 1,  nucl 1,  mito 1,  pero 1,  chlo_mito 1  (predict for XP_052303177.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006369419.1)
other 9  (predict for XP_024449718.1)
other 8  (predict for XP_052303176.1)
other 8  (predict for XP_052303177.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094947

.
ppo-r.4
for
18094947

.
ppo-u.5
for
7488179

.
gma-u.5
for
100818784

.
gma-u.5
for
100788070

.
gma-u.5
for
100787019

.
mtr-u.5
for
11443010

.
ath-u.5
for
FUS12

.
vvi-u.5
for
100256855

.
sly-u.5
for
101258397

.
sly-u.5
for
101253844

.
sly-u.5
for
101258618

.
osa-u.5
for
4326902

.
zma-u.5
for
103634653

.
zma-u.5
for
100283498

.


Ortholog ID: 5068
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol FUS12 LOC100787019 LOC100818784 LOC101258618 LOC101258397 LOC4326902 LOC100283498 LOC103634653 LOC103829642 LOC103858338 LOC100256855 LOC18094947 LOC7488179 LOC11443010 LOC123069709 LOC123078197 LOC123443541 LOC107891480 LOC107953235 LOC106438415 LOC106396476 CHLRE_01g030800v5 LOC8074543 LOC102578848 LOC102580660 LOC102617735 LOC100836634 LOC107807237 LOC107767670
Function* proteasome family protein COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 uncharacterized protein COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2-like COP9 signalosome complex subunit 2-like COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae04120 Ubiquitin mediated proteolysis 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04130 SNARE interactions in vesicular transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 7
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817241 100787019 100818784 101258618 101258397 4326902 100283498 103634653 103829642 103858338 100256855 18094947 7488179 11443010 123069709 123078197 123443541 107891480 107953235 106438415 106396476 5715373 8074543 102578848 102580660 102617735 100836634 107807237 107767670
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