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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18095314   phosphoglucan phosphatase LSF1, chloroplastic 
 ppo-r.4   18095314   phosphoglucan phosphatase LSF1, chloroplastic 
 gma-u.5   100814503   phosphoglucan phosphatase LSF1, chloroplastic 
 gma-u.5   100806392   phosphoglucan phosphatase LSF1, chloroplastic 
 mtr-u.5   25498007   phosphoglucan phosphatase LSF1, chloroplastic 
 ath-u.5   LSF1   uncharacterized protein 
 vvi-u.5   100252584   phosphoglucan phosphatase LSF1, chloroplastic 
 sly-u.5   101243774   phosphoglucan phosphatase LSF1, chloroplastic 
 osa-u.5   4345438   phosphoglucan phosphatase LSF1, chloroplastic 
 zma-u.5   103643331   phosphoglucan phosphatase LSF1, chloroplastic 

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Top 50 coexpressed genes to 18095314 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18095314 (ppo-u.5 coexpression data)

CoexMap"18095314"


ppoLOC18095314 | Entrez gene ID : 18095314    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005983 [list] [network] starch catabolic process  (4 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (162 genes)  IEA  
GO CC
GO:0043036 [list] [network] starch grain  (4 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity  (21 genes)  IEA  
GO:0019203 [list] [network] carbohydrate phosphatase activity  (24 genes)  IEA  
Protein XP_006369913.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_006369913.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for XP_006369913.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18095314

.
ppo-r.4
for
18095314

.
gma-u.5
for
100814503

.
gma-u.5
for
100806392

.
mtr-u.5
for
25498007

.
ath-u.5
for
LSF1

.
vvi-u.5
for
100252584

.
sly-u.5
for
101243774

.
osa-u.5
for
4345438

.
zma-u.5
for
103643331

.


Ortholog ID: 10778
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LSF1 LOC100814503 LOC100806392 LOC101243774 LOC4345438 LOC103643331 LOC103858913 LOC100252584 LOC18095314 LOC25498007 LOC123149230 LOC123070392 LOC123452445 LOC107942327 LOC107926470 LOC106388667 LOC106438896 LOC8070005 LOC102603794 LOC102615969 LOC100836564 LOC107801246 LOC107766450
Function* uncharacterized protein phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic phosphoglucan phosphatase LSF1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath00195 Photosynthesis 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 8
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00230 Purine metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03010 Ribosome 3
tae03060 Protein export 3
tae04145 Phagosome 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00910 Nitrogen metabolism 2
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00910 Nitrogen metabolism 2
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00511 Other glycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821127 100814503 100806392 101243774 4345438 103643331 103858913 100252584 18095314 25498007 123149230 123070392 123452445 107942327 107926470 106388667 106438896 8070005 102603794 102615969 100836564 107801246 107766450
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