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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18095609   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-r.4   18095609   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7462343   ultraviolet-B receptor UVR8 
 gma-u.5   100782653   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100786672   ultraviolet-B receptor UVR8 
 mtr-u.5   25487365   probable E3 ubiquitin-protein ligase HERC4 
 ath-u.5   AT3G15430   Regulator of chromosome condensation (RCC1) family protein 
 vvi-u.5   100262257   ultraviolet-B receptor UVR8 
 sly-u.5   101251010   ultraviolet-B receptor UVR8 
 osa-u.5   4343161   ultraviolet-B receptor UVR8 
 zma-u.5   103647289   ultraviolet-B receptor UVR8 
 zma-u.5   100382481   putative regulator of chromosome condensation (RCC1) family protein 

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Top 50 coexpressed genes to 18095609 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18095609 (ppo-u.5 coexpression data)

CoexMap"18095609"


ppoLOC18095609 | Entrez gene ID : 18095609    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_024460782.1 [sequence] [blastp]
XP_052305893.1 [sequence] [blastp]
XP_052305894.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  cysk 1,  cyto 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_024460782.1)
nucl 5,  chlo 1,  cysk 1,  cyto 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_052305893.1)
nucl 5,  chlo 1,  cysk 1,  cyto 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_052305894.1)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for XP_024460782.1)
scret 4,  other 4  (predict for XP_052305893.1)
scret 4,  other 4  (predict for XP_052305894.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18095609

.
ppo-r.4
for
18095609

.
ppo-u.5
for
7462343

.
gma-u.5
for
100782653

.
gma-u.5
for
100786672

.
mtr-u.5
for
25487365

.
ath-u.5
for
AT3G15430

.
vvi-u.5
for
100262257

.
sly-u.5
for
101251010

.
osa-u.5
for
4343161

.
zma-u.5
for
103647289

.
zma-u.5
for
100382481

.


Ortholog ID: 8004
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G15430 LOC100782653 LOC100786672 LOC101251010 LOC4343161 LOC100382481 LOC103647289 LOC103841435 LOC103869920 LOC100262257 LOC7462343 LOC18095609 LOC25487365 LOC123188575 LOC123044788 LOC123426095 LOC107903556 LOC107948634 LOC106401338 LOC106380710 LOC110432859 LOC102584399 LOC102616128 LOC100839797 LOC107797102 LOC107822820
Function* Regulator of chromosome condensation (RCC1) family protein PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 putative regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 probable E3 ubiquitin-protein ligase HERC4 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC3 probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820782 100782653 100786672 101251010 4343161 100382481 103647289 103841435 103869920 100262257 7462343 18095609 25487365 123188575 123044788 123426095 107903556 107948634 106401338 106380710 110432859 102584399 102616128 100839797 107797102 107822820
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