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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18096072   uncharacterized LOC18096072 
 ppo-r.4   18096072   uncharacterized LOC18096072 
 ppo-u.5   7481690   uncharacterized LOC7481690 
 ppo-u.5   7485640   uncharacterized LOC7485640 
 gma-u.5   100813262   NPC intracellular cholesterol transporter 1 
 gma-u.5   100810332   NPC intracellular cholesterol transporter 1 
 gma-u.5   100795551   NPC intracellular cholesterol transporter 1 
 mtr-u.5   11425301   NPC intracellular cholesterol transporter 1 
 mtr-u.5   25490313   NPC intracellular cholesterol transporter 1 
 ath-u.5   AT4G38350   Patched family protein 
 ath-u.5   AT1G42470   Patched family protein 
 vvi-u.5   100242789   uncharacterized LOC100242789 
 vvi-u.5   100257163   uncharacterized LOC100257163 
 sly-u.5   101260723   uncharacterized LOC101260723 
 osa-u.5   9266400   uncharacterized LOC9266400 
 zma-u.5   103641981   uncharacterized LOC103641981 

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Top 50 coexpressed genes to 18096072 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18096072 (ppo-u.5 coexpression data)

CoexMap"18096072"


ppoLOC18096072 | Entrez gene ID : 18096072    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04142 [list] [network] Lysosome (97 genes)
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3780 genes)  IEA  
GO MF
GO:0005319 [list] [network] lipid transporter activity  (44 genes)  IEA  
Protein XP_006386142.1 [sequence] [blastp]
XP_052306872.1 [sequence] [blastp]
XP_052306873.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 2  (predict for XP_006386142.1)
plas 8,  E.R. 2  (predict for XP_052306872.1)
plas 8,  E.R. 2  (predict for XP_052306873.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_006386142.1)
scret 9  (predict for XP_052306872.1)
scret 9  (predict for XP_052306873.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18096072

.
ppo-r.4
for
18096072

.
ppo-u.5
for
7481690

.
ppo-u.5
for
7485640

.
gma-u.5
for
100813262

.
gma-u.5
for
100810332

.
gma-u.5
for
100795551

.
mtr-u.5
for
11425301

.
mtr-u.5
for
25490313

.
ath-u.5
for
AT4G38350

.
ath-u.5
for
AT1G42470

.
vvi-u.5
for
100242789

.
vvi-u.5
for
100257163

.
sly-u.5
for
101260723

.
osa-u.5
for
9266400

.
zma-u.5
for
103641981

.


Ortholog ID: 5159
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta
Symbol AT4G38350 AT1G42470 LOC100810332 LOC100795551 LOC101260723 LOC9266400 LOC103641981 LOC103835189 LOC103829698 LOC100242789 LOC100257163 LOC7481690 LOC18096072 LOC11425301 LOC25490313 LOC123190059 LOC123054170 LOC123427500 LOC107922255 LOC107917961 LOC106446729 LOC106418356 CHLRE_12g550900v5 LOC8056603 LOC102600216 LOC102618032 LOC102615536 LOC100832617 LOC107824090
Function* Patched family protein Patched family protein NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 uncharacterized LOC101260723 uncharacterized LOC9266400 uncharacterized LOC103641981 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 uncharacterized LOC100242789 uncharacterized LOC100257163 uncharacterized LOC7481690 uncharacterized LOC18096072 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1-like uncharacterized protein Niemann-Pick C1 protein Niemann-Pick C1 protein-like uncharacterized LOC102618032 uncharacterized LOC102615536 NPC intracellular cholesterol transporter 1 uncharacterized LOC107824090
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04142 Lysosome 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04142 Lysosome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
vvi00600 Sphingolipid metabolism 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 6
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00500 Starch and sucrose metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03013 Nucleocytoplasmic transport 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 3
cit00190 Oxidative phosphorylation 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829992 840851 100810332 100795551 101260723 9266400 103641981 103835189 103829698 100242789 100257163 7481690 18096072 11425301 25490313 123190059 123054170 123427500 107922255 107917961 106446729 106418356 5719660 8056603 102600216 102618032 102615536 100832617 107824090
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