ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18096260	protein SICKLE
ppo-r.4	18096260	protein SICKLE
ppo-u.5	7486549	protein SICKLE
gma-u.5	100775211	protein SICKLE
gma-u.5	102669819	protein SICKLE
mtr-u.5	11437138	protein SICKLE
ath-u.5	SIC	hydroxyproline-rich glycoprotein family protein
bra-r.6	103862154	protein SICKLE
vvi-u.5	100243767	protein SICKLE
ghi-r.1	107959954	protein SICKLE
ghi-r.1	107903679	protein SICKLE
bna-r.1	106442059	protein SICKLE
bna-r.1	106396514	protein SICKLE-like
cit-r.1	102616474	protein SICKLE
sly-u.5	101257364	protein SICKLE
sly-u.5	101249715	protein SICKLE
sot-r.1	102603652	uncharacterized LOC102603652
sot-r.1	102583289	pro-resilin
nta-r.1	107803959	uncharacterized LOC107803959
nta-r.1	107806438	protein SICKLE-like
nta-r.1	107824050	uncharacterized LOC107824050
osa-u.5	4329451	protein SICKLE
zma-u.5	100273229	proline-rich protein 2
zma-u.5	100191384	uncharacterized LOC100191384
tae-r.2	123182479	protein pygopus
tae-r.2	123138093	protein pygopus
tae-r.2	123060987	protein pygopus
hvu-r.1	123413437	protein SICKLE
sbi-r.1	8080239	translation initiation factor IF-2
bdi-r.1	100832764	formin-like protein 20

Annotation

functional annotation

KEGG

GO BP

GO:0035196 [list] [network] miRNA processing	(4 genes)	IEA
GO:0000398 [list] [network] mRNA splicing, via spliceosome	(213 genes)	IEA

GO CC

GO MF

Protein

XP_006386460.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_006386460.3)

Subcellular
localization
TargetP

other 8

(predict for XP_006386460.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18096260	ppo-r.4 for 18096260	ppo-u.5 for 7486549	gma-u.5 for 100775211	gma-u.5 for 102669819	mtr-u.5 for 11437138	ath-u.5 for SIC	bra-r.6 for 103862154	vvi-u.5 for 100243767	ghi-r.1 for 107959954	ghi-r.1 for 107903679	bna-r.1 for 106442059	bna-r.1 for 106396514	cit-r.1 for 102616474	sly-u.5 for 101257364	sly-u.5 for 101249715	sot-r.1 for 102603652	sot-r.1 for 102583289	nta-r.1 for 107803959	nta-r.1 for 107806438	nta-r.1 for 107824050	osa-u.5 for 4329451	zma-u.5 for 100273229	zma-u.5 for 100191384	tae-r.2 for 123182479	tae-r.2 for 123138093	tae-r.2 for 123060987	hvu-r.1 for 123413437	sbi-r.1 for 8080239	bdi-r.1 for 100832764

Ortholog

Ortholog ID: 6621

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SIC

Function^*

protein SICKLE

hydroxyproline-rich glycoprotein family protein

protein SICKLE

protein SICKLE-like

protein SICKLE

uncharacterized LOC102603652

pro-resilin

uncharacterized LOC107803959

uncharacterized LOC107824050

protein SICKLE

proline-rich protein 2

uncharacterized LOC100191384

protein pygopus

protein SICKLE

translation initiation factor IF-2

formin-like protein 20

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	2
gma00514	Other types of O-glycan biosynthesis	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03082	ATP-dependent chromatin remodeling	3
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	3
ghi03040	Spliceosome	2
ghi03082	ATP-dependent chromatin remodeling	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	3
ghi03040	Spliceosome	2
ghi03082	ATP-dependent chromatin remodeling	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	3
sot00670	One carbon pool by folate	3
sot00230	Purine metabolism	2
sot00260	Glycine, serine and threonine metabolism	2
sot00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta03015	mRNA surveillance pathway	3
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma03040	Spliceosome	2
zma03013	Nucleocytoplasmic transport	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2
sbi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	5
bdi03015	mRNA surveillance pathway	2
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

18096260

7486549

100775211

102669819

11437138

828552

103862154

100243767

107959954

107903679

106442059

106396514

102616474

101257364

101249715

102603652

102583289

107803959

107824050

107796534

4329451

100273229

100191384

123182479

123138093

123060987

123413437

8080239

100832764

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18096260 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18096260 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	1	1	2	2	1	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18096260 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18096260 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**