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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18096466   homeobox protein LUMINIDEPENDENS 
 ppo-r.4   18096466   homeobox protein LUMINIDEPENDENS 
 ppo-u.5   7491316   homeobox protein LUMINIDEPENDENS 
 gma-u.5   100806633   homeobox protein LUMINIDEPENDENS 
 gma-u.5   100780237   homeobox protein LUMINIDEPENDENS 
 mtr-u.5   11433572   homeobox protein LUMINIDEPENDENS 
 ath-u.5   LD   Homeodomain-like superfamily protein 
 vvi-u.5   100249358   homeobox protein LUMINIDEPENDENS 
 sly-u.5   101255241   homeobox protein LUMINIDEPENDENS 
 sly-u.5   101260081   homeobox protein LUMINIDEPENDENS-like 
 osa-u.5   9267191   homeobox protein LUMINIDEPENDENS 
 zma-u.5   103650799   homeobox protein LUMINIDEPENDENS 

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Top 50 coexpressed genes to 18096466 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18096466 (ppo-u.5 coexpression data)

CoexMap"18096466"


ppoLOC18096466 | Entrez gene ID : 18096466    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (17 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_024447987.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024447987.2)
Subcellular
localization
TargetP
other 9  (predict for XP_024447987.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18096466

.
ppo-r.4
for
18096466

.
ppo-u.5
for
7491316

.
gma-u.5
for
100806633

.
gma-u.5
for
100780237

.
mtr-u.5
for
11433572

.
ath-u.5
for
LD

.
vvi-u.5
for
100249358

.
sly-u.5
for
101255241

.
sly-u.5
for
101260081

.
osa-u.5
for
9267191

.
zma-u.5
for
103650799

.


Ortholog ID: 8546
Species ath gma gma sly sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol LD LOC100780237 LOC100806633 LOC101260081 LOC101255241 LOC9267191 LOC103650799 LOC103868201 LOC100249358 LOC18096466 LOC7491316 LOC11433572 LOC123080461 LOC123072213 LOC123445357 LOC107952065 LOC107913458 LOC106401410 LOC125596347 LOC8059417 LOC102603564 LOC102604116 LOC102612367 LOC100832034 LOC107774174 LOC107796723
Function* Homeodomain-like superfamily protein homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS-like homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS-like homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS-like homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS homeobox protein LUMINIDEPENDENS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827904 100780237 100806633 101260081 101255241 9267191 103650799 103868201 100249358 18096466 7491316 11433572 123080461 123072213 123445357 107952065 107913458 106401410 125596347 8059417 102603564 102604116 102612367 100832034 107774174 107796723
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