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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-r.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.5   7470541   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.5   100792913   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.5   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.5   100782132   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   11442044   mediator of RNA polymerase II transcription subunit 15a 
 ath-u.5   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 vvi-u.5   100264243   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.5   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.5   4346348   mediator of RNA polymerase II transcription subunit 15a 
 zma-u.5   103643172   mediator of RNA polymerase II transcription subunit 15a 
 zma-u.5   100383729   uncharacterized LOC100383729 

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Top 50 coexpressed genes to 18096675 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18096675 (ppo-u.5 coexpression data)

CoexMap"18096675"


ppoLOC18096675 | Entrez gene ID : 18096675    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (47 genes)  IEA  
GO:0003713 [list] [network] transcription coactivator activity  (49 genes)  IEA  
Protein XP_024453776.2 [sequence] [blastp]
XP_024453778.2 [sequence] [blastp]
XP_052306891.1 [sequence] [blastp]
XP_052306892.1 [sequence] [blastp]
XP_052306893.1 [sequence] [blastp]
XP_052306895.1 [sequence] [blastp]
XP_052306896.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for XP_024453776.2)
chlo 5,  nucl 5  (predict for XP_024453778.2)
nucl 9,  cyto 1,  cysk 1  (predict for XP_052306891.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_052306892.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_052306893.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_052306895.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_052306896.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024453776.2)
chlo 9  (predict for XP_024453778.2)
other 8  (predict for XP_052306891.1)
other 8  (predict for XP_052306892.1)
other 9  (predict for XP_052306893.1)
other 8  (predict for XP_052306895.1)
other 8  (predict for XP_052306896.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18096675

.
ppo-r.4
for
18096675

.
ppo-u.5
for
7470541

.
gma-u.5
for
100792913

.
gma-u.5
for
100783762

.
gma-u.5
for
100782132

.
mtr-u.5
for
11430217

.
mtr-u.5
for
11442044

.
ath-u.5
for
NRB4

.
vvi-u.5
for
100264243

.
sly-u.5
for
101257852

.
osa-u.5
for
4346348

.
zma-u.5
for
103643172

.
zma-u.5
for
100383729

.


Ortholog ID: 3391
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol NRB4 LOC100782132 LOC100792913 LOC101257852 LOC4346348 LOC103643172 LOC100383729 LOC103842885 LOC103872366 LOC100264243 LOC18096675 LOC11430217 LOC11442044 LOC123165184 LOC123154180 LOC123407450 LOC123411893 LOC107906442 LOC107958434 LOC106367074 LOC106387568 LOC8054823 LOC102602431 LOC102616712 LOC100840942 LOC107772171 LOC107773992
Function* mediator of RNA polymerase II transcription subunit 15a-like protein mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC100383729 mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a-like mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 5
bdi03083 Polycomb repressive complex 2
bdi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838147 100782132 100792913 101257852 4346348 103643172 100383729 103842885 103872366 100264243 18096675 11430217 11442044 123165184 123154180 123407450 123411893 107906442 107958434 106367074 106387568 8054823 102602431 102616712 100840942 107772171 107773992
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