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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098341   ras-related protein RABD1 
 ppo-r.4   18098341   ras-related protein RABD1 
 ppo-u.5   18105077   ras-related protein RABD2a 
 ppo-u.5   7461998   GTP-binding protein YPTM2 
 ppo-u.5   7453919   GTP-binding protein YPTM2 
 gma-u.5   RAB7P   ras-related protein RABD1-like 
 gma-u.5   100813403   ras-related protein RABD2a 
 gma-u.5   100818694   GTP-binding protein YPTM2 
 mtr-u.5   11434813   ras-related protein RABD1 
 mtr-u.5   11442372   ras-related protein RABD2a 
 mtr-u.5   25493604   GTP-binding protein YPTM2 
 ath-u.5   RAB1A   RAB GTPase homolog 1A 
 ath-u.5   RA-5   RAS 5 
 ath-u.5   ATFP8   Ras-related small GTP-binding family protein 
 vvi-u.5   100248422   GTP-binding protein YPTM2 
 vvi-u.5   100245986   GTP-binding protein YPTM2 
 vvi-u.5   100254021   ras-related protein RABD1 
 sly-u.5   Rab1B   small GTP-binding protein 
 sly-u.5   101252882   ras-related protein RABD2a 
 sly-u.5   Rab1C   small GTP-binding protein 
 osa-u.5   4337556   GTP-binding protein YPTM1 
 osa-u.5   4330181   GTP-binding protein YPTM2 
 osa-u.5   4325347   GTP-binding protein YPTM2 
 zma-u.5   100191848   Ras protein RIC1 
 zma-u.5   542396   ypt homolog 2 
 zma-u.5   542531   ypt homolog 1 

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Top 50 coexpressed genes to 18098341 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098341 (ppo-u.5 coexpression data)

CoexMap"18098341"


ppoLOC18098341 | Entrez gene ID : 18098341    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_006385060.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  extr 3,  nucl 2,  cyto 1,  chlo_mito 1  (predict for XP_006385060.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for XP_006385060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098341

.
ppo-r.4
for
18098341

.
ppo-u.5
for
18105077

.
ppo-u.5
for
7461998

.
ppo-u.5
for
7453919

.
gma-u.5
for
RAB7P

.
gma-u.5
for
100813403

.
gma-u.5
for
100818694

.
mtr-u.5
for
11434813

.
mtr-u.5
for
11442372

.
mtr-u.5
for
25493604

.
ath-u.5
for
RAB1A

.
ath-u.5
for
RA-5

.
ath-u.5
for
ATFP8

.
vvi-u.5
for
100248422

.
vvi-u.5
for
100245986

.
vvi-u.5
for
100254021

.
sly-u.5
for
Rab1B

.
sly-u.5
for
101252882

.
sly-u.5
for
Rab1C

.
osa-u.5
for
4337556

.
osa-u.5
for
4330181

.
osa-u.5
for
4325347

.
zma-u.5
for
100191848

.
zma-u.5
for
542396

.
zma-u.5
for
542531

.


Ortholog ID: 494
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RAB1C ATFP8 LOC100818694 RAB7P Rab1A Rab1B LOC4324675 LOC4337556 LOC542531 LOC100191848 LOC103843860 LOC103839540 LOC100254021 LOC100248422 LOC7477801 LOC7461998 LOC11434813 LOC25493604 LOC123061292 LOC123179836 LOC123426463 LOC123442625 LOC107912205 LOC107922713 LOC106406928 LOC106381870 CHLRE_12g560150v5 LOC8078596 LOC8065289 LOC102587256 LOC102596483 LOC102624523 LOC102628383 LOC100835716 LOC100841613 LOC107779090 LOC107813681
Function* RAB GTPase homolog 1C Ras-related small GTP-binding family protein GTP-binding protein YPTM2 ras-related protein RABD1-like small GTP-binding protein small GTP-binding protein ras-related protein RIC1-like GTP-binding protein YPTM1 ypt homolog 1 Ras protein RIC1 ras-related protein RABD2a ras-related protein RABD2b ras-related protein RABD1 GTP-binding protein YPTM2 GTP-binding protein YPTM2 GTP-binding protein YPTM2 ras-related protein RABD1 GTP-binding protein YPTM2 ras-related protein RIC1 ras-related protein RABD1 ras-related protein RABD1-like GTP-binding protein YPTM2-like GTP-binding protein YPTM2 GTP-binding protein YPTM2 ras-related protein RABD2b ras-related protein RABD2b uncharacterized protein ras-related protein RIC1 ras-related protein RABD2c ras-related protein RABD2a-like GTP-binding protein YPTM2 ras-related protein RABD2a GTP-binding protein YPTM2-like ras-related protein RABD1 GTP-binding protein YPTM2 ras-related protein RABD2a-like ras-related protein RIC1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 5
ath04136 Autophagy - other 3
ath04144 Endocytosis 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00592 alpha-Linolenic acid metabolism 2
gma01040 Biosynthesis of unsaturated fatty acids 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04016 MAPK signaling pathway - plant 3
sly04070 Phosphatidylinositol signaling system 3
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa04136 Autophagy - other 4
osa04145 Phagosome 2
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 4
osa00600 Sphingolipid metabolism 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 7
zma04144 Endocytosis 3
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04070 Phosphatidylinositol signaling system 4
bra04075 Plant hormone signal transduction 4
bra04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04145 Phagosome 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00190 Oxidative phosphorylation 4
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae04144 Endocytosis 4
tae04145 Phagosome 4
tae04148 Efferocytosis 4
tae00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04142 Lysosome 4
ghi04145 Phagosome 4
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi04144 Endocytosis 2
sbi04146 Peroxisome 2
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00071 Fatty acid degradation 3
sbi00410 beta-Alanine metabolism 3
sbi00592 alpha-Linolenic acid metabolism 3
sbi00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
sot04145 Phagosome 5
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 3
cit04144 Endocytosis 2
cit04145 Phagosome 2
cit04148 Efferocytosis 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi01240 Biosynthesis of cofactors 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta04145 Phagosome 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827468 820345 100818694 100796206 544010 544011 4324675 4337556 542531 100191848 103843860 103839540 100254021 100248422 7477801 7461998 11434813 25493604 123061292 123179836 123426463 123442625 107912205 107922713 106406928 106381870 5728675 8078596 8065289 102587256 102596483 102624523 102628383 100835716 100841613 107779090 107813681
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