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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098680   ATP-dependent DNA helicase Q-like SIM 
 ppo-r.4   18098680   ATP-dependent DNA helicase Q-like SIM 
 gma-u.5   100793222   ATP-dependent DNA helicase Q-like SIM 
 mtr-u.5   11415668   ATP-dependent DNA helicase Q-like SIM 
 ath-u.5   RECQSIM   RECQ helicase SIM 
 vvi-u.5   100257897   ATP-dependent DNA helicase Q-like SIM 
 sly-u.5   101250452   ATP-dependent DNA helicase Q-like SIM 
 osa-u.5   4337828   ATP-dependent DNA helicase Q-like SIM 
 zma-u.5   100382628   uncharacterized LOC100382628 

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Top 50 coexpressed genes to 18098680 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098680 (ppo-u.5 coexpression data)

CoexMap"18098680"


ppoLOC18098680 | Entrez gene ID : 18098680    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (74 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (396 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (10 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (16 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024457950.2 [sequence] [blastp]
XP_052309279.1 [sequence] [blastp]
XP_052309280.1 [sequence] [blastp]
XP_052309281.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  plas 3  (predict for XP_024457950.2)
nucl 7,  plas 3  (predict for XP_052309279.1)
nucl 6,  plas 4  (predict for XP_052309280.1)
nucl 6,  plas 4  (predict for XP_052309281.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024457950.2)
other 9  (predict for XP_052309279.1)
other 9  (predict for XP_052309280.1)
other 9  (predict for XP_052309281.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098680

.
ppo-r.4
for
18098680

.
gma-u.5
for
100793222

.
mtr-u.5
for
11415668

.
ath-u.5
for
RECQSIM

.
vvi-u.5
for
100257897

.
sly-u.5
for
101250452

.
osa-u.5
for
4337828

.
zma-u.5
for
100382628

.


Ortholog ID: 10331
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol RECQSIM LOC100793222 LOC101250452 LOC4337828 LOC100382628 LOC103874517 LOC100257897 LOC18098680 LOC11415668 LOC123112731 LOC123191338 LOC123425471 LOC107927308 LOC107887642 LOC106348681 LOC8069503 LOC102598356 LOC102608985 LOC100821709 LOC107761280 LOC107814562
Function* RECQ helicase SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM uncharacterized LOC100382628 ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM ATP-dependent DNA helicase Q-like SIM
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 3
ath03430 Mismatch repair 3
ath03460 Fanconi anemia pathway 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03440 Homologous recombination 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 3
bra03440 Homologous recombination 2
bra03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr00905 Brassinosteroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
ghi03018 RNA degradation 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
ghi04626 Plant-pathogen interaction 6
ghi03013 Nucleocytoplasmic transport 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
bna00230 Purine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04145 Phagosome 3
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi04148 Efferocytosis 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832830 100793222 101250452 4337828 100382628 103874517 100257897 18098680 11415668 123112731 123191338 123425471 107927308 107887642 106348681 8069503 102598356 102608985 100821709 107761280 107814562
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