ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18099208	golgin candidate 5
ppo-r.4	18099208	golgin candidate 5
ppo-u.5	7480179	uncharacterized LOC7480179
gma-u.5	100820457	uncharacterized LOC100820457
gma-u.5	100801613	uncharacterized LOC100801613
gma-u.5	100799360	uncharacterized LOC100799360
mtr-u.5	11415815	uncharacterized LOC11415815
ath-u.5	AT2G17990	polyamine-modulated factor 1-binding protein
ath-u.5	AT5G66250	kinectin-like protein
vvi-u.5	100262595	uncharacterized LOC100262595
sly-u.5	101257129	uncharacterized LOC101257129
sly-u.5	101246997	uncharacterized LOC101246997
osa-u.5	4342071	uncharacterized LOC4342071
zma-u.5	100192653	uncharacterized LOC100192653

functional annotation

KEGG

GO BP

GO:0009959 [list] [network] negative gravitropism	(13 genes)	IEA
GO:0009639 [list] [network] response to red or far red light	(47 genes)	IEA

GO CC

GO MF

Protein

XP_006383121.2 [sequence] [blastp]
XP_052308814.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, chlo 2, nucl 2, cyto_pero 2	(predict for XP_006383121.2)
nucl 3, cyto 3, cyto_nucl 3, chlo 2	(predict for XP_052308814.1)

Subcellular
localization
TargetP

other 8	(predict for XP_006383121.2)
other 8	(predict for XP_052308814.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18099208 .	ppo-r.4 for 18099208 .	ppo-u.5 for 7480179 .	gma-u.5 for 100820457 .	gma-u.5 for 100801613 .	gma-u.5 for 100799360 .	mtr-u.5 for 11415815 .	ath-u.5 for AT2G17990 .	ath-u.5 for AT5G66250 .	vvi-u.5 for 100262595 .	sly-u.5 for 101257129 .	sly-u.5 for 101246997 .	osa-u.5 for 4342071 .	zma-u.5 for 100192653 .

Ortholog ID: 4516

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

kinectin-like protein

uncharacterized LOC100801613

uncharacterized LOC100787535

uncharacterized LOC101246997

uncharacterized LOC101257129

uncharacterized LOC4342071

uncharacterized LOC100192653

tropomyosin alpha-1 chain

kinesin-like protein KIN-7K, chloroplastic

uncharacterized LOC100262595

golgin candidate 5

uncharacterized LOC7480179

uncharacterized LOC11415815

uncharacterized LOC123164963

uncharacterized LOC123157204

uncharacterized LOC123407497

uncharacterized LOC107913003

uncharacterized LOC107936559

uncharacterized BNAC07G48120D

golgin subfamily A member 5-like

uncharacterized LOC110431225

uncharacterized LOC102589741

uncharacterized LOC102586875

uncharacterized LOC102615546

uncharacterized LOC100838451

uncharacterized LOC107775258

uncharacterized LOC107778890

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly04814	Motor proteins	3
sly04142	Lysosome	2
sly05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	3
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4
bdi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04141	Protein processing in endoplasmic reticulum	3
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

836757

100801613

100787535

101246997

101257129

4342071

100192653

103874092

103828440

100262595

18099208

7480179

11415815

123164963

123157204

123407497

107913003

107936559

106396714

106362750

110431225

102589741

102586875

102615546

100838451

107775258

107778890

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18099208 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18099208 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	cre	ghi	cit	hvu	bdi	sot	bra	sbi	tae	nta	bna
Paralog	3	3	1	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18099208 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18099208 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**