ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18099815	amino acid transporter AVT1A
ppo-r.4	18099815	amino acid transporter AVT1A
gma-u.5	100816368	amino acid transporter AVT1A
gma-u.5	100816431	amino acid transporter AVT1A
gma-u.5	100790344	amino acid transporter AVT1A
mtr-u.5	11438359	amino acid transporter AVT1A
mtr-u.5	11411503	amino acid transporter AVT1A
mtr-u.5	11408946	amino acid transporter AVT1A
ath-u.5	AT2G41190	Transmembrane amino acid transporter family protein
vvi-u.5	100265815	amino acid transporter AVT1A
sly-u.5	101267002	amino acid transporter AVT1A
osa-u.5	4330966	amino acid transporter AVT1A
zma-u.5	103627843	amino acid transporter AVT1A
zma-u.5	100274249	uncharacterized LOC100274249
zma-u.5	100383728	Transmembrane amino acid transporter family protein

Annotation

functional annotation

KEGG

pop04082 [list] [network] Neuroactive ligand signaling (11 genes)

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(1125 genes)

IEA

GO MF

Protein

XP_052309429.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_052309429.1)

Subcellular
localization
TargetP

other 9

(predict for XP_052309429.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18099815	ppo-r.4 for 18099815	gma-u.5 for 100816368	gma-u.5 for 100816431	gma-u.5 for 100790344	mtr-u.5 for 11438359	mtr-u.5 for 11411503	mtr-u.5 for 11408946	ath-u.5 for AT2G41190	vvi-u.5 for 100265815	sly-u.5 for 101267002	osa-u.5 for 4330966	zma-u.5 for 103627843	zma-u.5 for 100274249	zma-u.5 for 100383728

Ortholog

Ortholog ID: 4702

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

amino acid transporter AVT1A

Transmembrane amino acid transporter family protein

amino acid transporter AVT1A

vacuolar amino acid transporter 1

amino acid transporter AVT1A-like

amino acid transporter AVT1A

uncharacterized LOC100274249

amino acid transporter AVT1A

vacuolar amino acid transporter 1

amino acid transporter AVT1A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	2
ppo01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04082	Neuroactive ligand signaling	2
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04082	Neuroactive ligand signaling	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00592	alpha-Linolenic acid metabolism	2
mtr04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	3
bra04146	Peroxisome	2
bra00071	Fatty acid degradation	2
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2
bra00010	Glycolysis / Gluconeogenesis	2
bra00620	Pyruvate metabolism	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04082	Neuroactive ligand signaling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04082	Neuroactive ligand signaling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	6
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly00330	Arginine and proline metabolism	3
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	8
sot01230	Biosynthesis of amino acids	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04082	Neuroactive ligand signaling	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00280	Valine, leucine and isoleucine degradation	6
zma01210	2-Oxocarboxylic acid metabolism	3
zma00270	Cysteine and methionine metabolism	2
zma00290	Valine, leucine and isoleucine biosynthesis	2
zma00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma04016	MAPK signaling pathway - plant	3
zma00280	Valine, leucine and isoleucine degradation	2
zma00640	Propanoate metabolism	2
zma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04082	Neuroactive ligand signaling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu04144	Endocytosis	2
hvu04130	SNARE interactions in vesicular transport	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	4
sbi00330	Arginine and proline metabolism	3
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	5
cre00920	Sulfur metabolism	4
cre01200	Carbon metabolism	3
cre00270	Cysteine and methionine metabolism	2
cre01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

18099815

100816431

100790344

11438359

11411503

818718

103865864

103857969

100265815

107951954

107950697

106391641

106438000

102615499

101267002

102589686

107762446

107821098

4330966

103627843

100274249

123138896

123401826

8081963

100845904

5728982

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18099815 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18099815 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	3	1	1	1	1	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18099815 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18099815 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**