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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18100352   protein CTR9 homolog 
 ppo-r.4   18100352   protein CTR9 homolog 
 gma-u.5   100804954   protein CTR9 homolog 
 gma-u.5   100794371   protein CTR9 homolog 
 mtr-u.5   25486489   protein CTR9 homolog 
 ath-u.5   ELF8   binding protein 
 vvi-u.5   100252478   protein CTR9 homolog 
 sly-u.5   101255810   protein CTR9 homolog 
 osa-u.5   4343217   protein CTR9 homolog 
 zma-u.5   103646054   protein CTR9 homolog 
 zma-u.5   103631951   protein CTR9 homolog 

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Top 50 coexpressed genes to 18100352 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18100352 (ppo-u.5 coexpression data)

CoexMap"18100352"


ppoLOC18100352 | Entrez gene ID : 18100352    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0016593 [list] [network] Cdc73/Paf1 complex  (9 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (23 genes)  IEA  
Protein XP_024458795.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_E.R. 3  (predict for XP_024458795.1)
Subcellular
localization
TargetP
other 6  (predict for XP_024458795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18100352

.
ppo-r.4
for
18100352

.
gma-u.5
for
100804954

.
gma-u.5
for
100794371

.
mtr-u.5
for
25486489

.
ath-u.5
for
ELF8

.
vvi-u.5
for
100252478

.
sly-u.5
for
101255810

.
osa-u.5
for
4343217

.
zma-u.5
for
103646054

.
zma-u.5
for
103631951

.


Ortholog ID: 9380
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ELF8 LOC100794371 LOC100804954 LOC101255810 LOC4343217 LOC103631951 LOC103646054 LOC103860352 LOC100252478 LOC18100352 LOC25486489 LOC123138363 LOC123145603 LOC123404486 LOC107929933 LOC107932237 LOC106439774 LOC106418336 CHLRE_03g189605v5 LOC8060410 LOC102601563 LOC102612227 LOC100836474 LOC107779418 LOC107811023
Function* binding protein protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog uncharacterized protein protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 5
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 6
sbi04120 Ubiquitin mediated proteolysis 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815177 100794371 100804954 101255810 4343217 103631951 103646054 103860352 100252478 18100352 25486489 123138363 123145603 123404486 107929933 107932237 106439774 106418336 5717506 8060410 102601563 102612227 100836474 107779418 107811023
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