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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18101280   protein FAR1-RELATED SEQUENCE 3 
 ppo-r.4   18101280   protein FAR1-RELATED SEQUENCE 3 
 ppo-u.5   18098179   protein FAR1-RELATED SEQUENCE 9 
 ppo-u.5   18103446   protein FAR1-RELATED SEQUENCE 5 
 ppo-u.5   18098178   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100781438   protein FAR1-RELATED SEQUENCE 9 
 gma-u.5   100782414   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100786206   protein FAR1-RELATED SEQUENCE 3 
 mtr-u.5   112421848   protein FAR1-RELATED SEQUENCE 5 
 mtr-u.5   112420389   protein FAR1-RELATED SEQUENCE 3 
 ath-u.5   FRS3   FAR1-related sequence 3 
 ath-u.5   FRS9   FAR1-related sequence 9 
 ath-u.5   FRS5   FAR1-related sequence 5 
 vvi-u.5   100249541   protein FAR1-RELATED SEQUENCE 3 
 vvi-u.5   100263583   protein FAR1-RELATED SEQUENCE 5 
 vvi-u.5   100255920   protein FAR1-RELATED SEQUENCE 5 
 sly-u.5   101254298   protein FAR1-RELATED SEQUENCE 5-like 
 sly-u.5   101250054   protein FAR1-RELATED SEQUENCE 3-like 
 sly-u.5   101258670   protein FAR1-RELATED SEQUENCE 9 
 osa-u.5   4333612   protein FAR1-RELATED SEQUENCE 5 
 osa-u.5   4351811   protein FAR1-RELATED SEQUENCE 5 
 osa-u.5   9271013   protein FAR1-RELATED SEQUENCE 5 
 zma-u.5   103643784   protein FAR1-RELATED SEQUENCE 5 
 zma-u.5   103626030   protein FAR1-RELATED SEQUENCE 5 

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Top 50 coexpressed genes to 18101280 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18101280 (ppo-u.5 coexpression data)

CoexMap"18101280"


ppoLOC18101280 | Entrez gene ID : 18101280    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_006379425.2 [sequence] [blastp]
XP_006379426.2 [sequence] [blastp]
XP_024463152.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_006379425.2)
nucl 8,  cyto 2  (predict for XP_006379426.2)
nucl 9,  cyto 1  (predict for XP_024463152.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006379425.2)
other 9  (predict for XP_006379426.2)
other 9  (predict for XP_024463152.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18101280

.
ppo-r.4
for
18101280

.
ppo-u.5
for
18098179

.
ppo-u.5
for
18103446

.
ppo-u.5
for
18098178

.
gma-u.5
for
100781438

.
gma-u.5
for
100782414

.
gma-u.5
for
100786206

.
mtr-u.5
for
112421848

.
mtr-u.5
for
112420389

.
ath-u.5
for
FRS3

.
ath-u.5
for
FRS9

.
ath-u.5
for
FRS5

.
vvi-u.5
for
100249541

.
vvi-u.5
for
100263583

.
vvi-u.5
for
100255920

.
sly-u.5
for
101254298

.
sly-u.5
for
101250054

.
sly-u.5
for
101258670

.
osa-u.5
for
4333612

.
osa-u.5
for
4351811

.
osa-u.5
for
9271013

.
zma-u.5
for
103643784

.
zma-u.5
for
103626030

.


Ortholog ID: 915
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol FRS9 FRS5 LOC100786206 LOC100782414 LOC101250054 LOC101260088 LOC4333612 LOC4351811 LOC103626030 LOC103643784 LOC103858333 LOC103834549 LOC100259892 LOC100244871 LOC18098178 LOC18098179 LOC112420389 LOC123087363 LOC123110661 LOC123446920 LOC123397094 LOC107898892 LOC121224218 LOC106438417 LOC106361129 LOC8056771 LOC8070371 LOC102591759 LOC102596648 LOC102626563 LOC102628171 LOC100844318 LOC107797540 LOC107805239
Function* FAR1-related sequence 9 FAR1-related sequence 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03013 Nucleocytoplasmic transport 5
ghi03015 mRNA surveillance pathway 5
ghi03440 Homologous recombination 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 6
bna03030 DNA replication 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04075 Plant hormone signal transduction 2
nta00310 Lysine degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829973 829974 100786206 100782414 101250054 101260088 4333612 4351811 103626030 103643784 103858333 103834549 100259892 100244871 18098178 18098179 112420389 123087363 123110661 123446920 123397094 107898892 121224218 106438417 106361129 8056771 8070371 102591759 102596648 102626563 102628171 100844318 107797540 107805239
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