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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469511   uncharacterized LOC7469511 
 gma-u.5   100802231   uncharacterized LOC100802231 
 gma-u.5   100789541   uncharacterized LOC100789541 
 mtr-u.5   11445207   uncharacterized LOC11445207 
 mtr-u.5   11416262   uncharacterized LOC11416262 
 ath-u.5   AT5G22040   ubiquitin carboxyl-terminal hydrolase 
 vvi-u.5   100261604   uncharacterized LOC100261604 
 sly-u.5   101262688   uncharacterized LOC101262688 
 osa-u.5   4332404   uncharacterized LOC4332404 
 zma-u.5   100276087   uncharacterized LOC100276087 

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Top 50 coexpressed genes to 7469511 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469511 (ppo-u.5 coexpression data)

CoexMap"18101294"


ppoLOC18101294 | Entrez gene ID : 18101294    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006379449.2 [sequence] [blastp]
XP_052310906.1 [sequence] [blastp]
XP_052310907.1 [sequence] [blastp]
XP_052310908.1 [sequence] [blastp]
XP_052310909.1 [sequence] [blastp]
XP_052310910.1 [sequence] [blastp]
XP_052310911.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006379449.2)
mito 4,  nucl 4,  chlo 2,  cyto_mito 2,  mito_plas 2  (predict for XP_052310906.1)
nucl 9  (predict for XP_052310907.1)
nucl 9  (predict for XP_052310908.1)
nucl 9  (predict for XP_052310909.1)
nucl 9  (predict for XP_052310910.1)
nucl 9  (predict for XP_052310911.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_006379449.2)
mito 8  (predict for XP_052310906.1)
mito 7,  other 4  (predict for XP_052310907.1)
mito 7,  other 4  (predict for XP_052310908.1)
mito 7,  other 4  (predict for XP_052310909.1)
mito 7,  other 4  (predict for XP_052310910.1)
mito 7,  other 4  (predict for XP_052310911.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469511

.
gma-u.5
for
100802231

.
gma-u.5
for
100789541

.
mtr-u.5
for
11445207

.
mtr-u.5
for
11416262

.
ath-u.5
for
AT5G22040

.
vvi-u.5
for
100261604

.
sly-u.5
for
101262688

.
osa-u.5
for
4332404

.
zma-u.5
for
100276087

.


Ortholog ID: 9684
Species ath gma gma sly osa zma vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G22040 LOC100789541 LOC100802231 LOC101262688 LOC4332404 LOC100276087 LOC100261604 LOC7469511 LOC11416262 LOC11445207 LOC123097908 LOC123092602 LOC123449021 LOC107906659 LOC107959235 LOC106386959 LOC106419566 LOC8084938 LOC102581583 LOC102625293 LOC100831278 LOC107822099 LOC107778476
Function* ubiquitin carboxyl-terminal hydrolase uncharacterized LOC100789541 uncharacterized LOC100802231 uncharacterized LOC101262688 uncharacterized LOC4332404 uncharacterized LOC100276087 uncharacterized LOC100261604 uncharacterized LOC7469511 uncharacterized LOC11416262 uncharacterized LOC11445207 uncharacterized LOC123097908 uncharacterized LOC123092602 uncharacterized LOC123449021 uncharacterized LOC107906659 uncharacterized LOC107959235 uncharacterized LOC106386959 uncharacterized LOC106419566 uncharacterized LOC8084938 probable serine/threonine-protein kinase DDB_G0280133 uncharacterized LOC102625293 uncharacterized LOC100831278 uncharacterized LOC107822099 uncharacterized LOC107778476
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 5
tae00310 Lysine degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03082 ATP-dependent chromatin remodeling 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832265 100789541 100802231 101262688 4332404 100276087 100261604 7469511 11416262 11445207 123097908 123092602 123449021 107906659 107959235 106386959 106419566 8084938 102581583 102625293 100831278 107822099 107778476
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