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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18102133   uncharacterized LOC18102133 
 ppo-r.4   18102133   uncharacterized LOC18102133 
 ppo-u.5   18109015   uncharacterized LOC18109015 
 ppo-u.5   18095236   cold shock domain-containing protein 3 
 gma-u.5   100804614   uncharacterized LOC100804614 
 gma-u.5   100802558   uncharacterized LOC100802558 
 gma-u.5   100527087   putative GRF zinc finger protein 
 mtr-u.5   112416309   uncharacterized LOC112416309 
 mtr-u.5   112416361   uncharacterized LOC112416361 
 ath-u.5   AT3G42860   zinc knuckle (CCHC-type) family protein 
 ath-u.5   AT5G13920   GRF zinc finger / Zinc knuckle protein 
 vvi-u.5   100245024   cold shock protein 1 
 sly-u.5   101256221   uncharacterized LOC101256221 
 osa-u.5   4334351   uncharacterized LOC4334351 
 zma-u.5   103644140   DNA-binding protein HEXBP 

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Top 50 coexpressed genes to 18102133 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18102133 (ppo-u.5 coexpression data)

CoexMap"18102133"


ppoLOC18102133 | Entrez gene ID : 18102133    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 3 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_024464589.2 [sequence] [blastp]
XP_024464590.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024464589.2)
nucl 10  (predict for XP_024464590.2)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_024464589.2)
chlo 9,  other 3  (predict for XP_024464590.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18102133

.
ppo-r.4
for
18102133

.
ppo-u.5
for
18109015

.
ppo-u.5
for
18095236

.
gma-u.5
for
100804614

.
gma-u.5
for
100802558

.
gma-u.5
for
100527087

.
mtr-u.5
for
112416309

.
mtr-u.5
for
112416361

.
ath-u.5
for
AT3G42860

.
ath-u.5
for
AT5G13920

.
vvi-u.5
for
100245024

.
sly-u.5
for
101256221

.
osa-u.5
for
4334351

.
zma-u.5
for
103644140

.


Ortholog ID: 4923
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi cit cit bdi nta nta
Symbol AT5G13920 AT3G42860 LOC100804614 LOC100527087 LOC101256221 LOC4334351 LOC103644140 LOC103856039 LOC103845042 LOC100245024 LOC18109015 LOC18102133 LOC112416309 LOC112416361 LOC123105321 LOC123113583 LOC123452584 LOC107962951 LOC107901775 LOC106371363 LOC106386738 LOC8083913 LOC102607900 LOC127900460 LOC100838417 LOC107799124 LOC107797633
Function* GRF zinc finger / Zinc knuckle protein zinc knuckle (CCHC-type) family protein uncharacterized LOC100804614 putative GRF zinc finger protein uncharacterized LOC101256221 uncharacterized LOC4334351 DNA-binding protein HEXBP uncharacterized LOC103856039 DNA-binding protein HEXBP cold shock protein 1 uncharacterized LOC18109015 uncharacterized LOC18102133 uncharacterized LOC112416309 uncharacterized LOC112416361 DNA-binding protein HEXBP DNA-binding protein HEXBP DNA-binding protein HEXBP-like DNA-binding protein HEXBP DNA-binding protein HEXBP-like cold shock protein 1 uncharacterized LOC106386738 cold shock domain-containing protein 3 uncharacterized LOC102607900 uncharacterized LOC127900460 DNA-binding protein HEXBP uncharacterized LOC107799124 uncharacterized LOC107797633
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma04075 Plant hormone signal transduction 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831239 823332 100804614 100527087 101256221 4334351 103644140 103856039 103845042 100245024 18109015 18102133 112416309 112416361 123105321 123113583 123452584 107962951 107901775 106371363 106386738 8083913 102607900 127900460 100838417 107799124 107797633
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