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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104645   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 ppo-u.5   18104650   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 gma-u.5   100818231   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 gma-u.5   100807217   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 mtr-u.5   25502626   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 mtr-u.5   25486682   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 mtr-u.5   25487644   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 vvi-u.5   100255005   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 vvi-u.5   100250499   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 sly-u.5   101246505   pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like 
 osa-u.5   4349037   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 osa-u.5   112936630   pentatricopeptide repeat-containing protein At2g20710, mitochondrial 
 zma-u.5   100274385   uncharacterized LOC100274385 

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Top 50 coexpressed genes to 18104645 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104645 (ppo-u.5 coexpression data)

CoexMap"18103015"


ppoLOC18103015 | Entrez gene ID : 18103015    
Species ppo gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 2 2 3 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024437155.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  plas 1,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_024437155.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024437155.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104645

.
ppo-u.5
for
18104650

.
gma-u.5
for
100818231

.
gma-u.5
for
100807217

.
mtr-u.5
for
25502626

.
mtr-u.5
for
25486682

.
mtr-u.5
for
25487644

.
vvi-u.5
for
100255005

.
vvi-u.5
for
100250499

.
sly-u.5
for
101246505

.
osa-u.5
for
4349037

.
osa-u.5
for
112936630

.
zma-u.5
for
100274385

.


Ortholog ID: 5469
Species gma gma sly osa zma bra vvi ppo mtr mtr tae tae ghi bna bna sbi sot sot cit bdi nta nta
Symbol LOC100807217 LOC100818231 LOC101246505 LOC4349037 LOC100274385 LOC103838017 LOC100255005 LOC18104645 LOC25487644 LOC25486682 LOC123047184 LOC123123025 LOC107946164 LOC106368844 LOC106445407 LOC8065206 LOC102583147 LOC102594985 LOC102621790 LOC100826667 LOC107830016 LOC107791903
Function* pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like pentatricopeptide repeat-containing protein At2g20710, mitochondrial uncharacterized LOC100274385 pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like pentatricopeptide repeat-containing protein At2g20710, mitochondrial pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03410 Base excision repair 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01240 Biosynthesis of cofactors 3
bra01232 Nucleotide metabolism 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr00230 Purine metabolism 2
mtr00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100807217 100818231 101246505 4349037 100274385 103838017 100255005 18104645 25487644 25486682 123047184 123123025 107946164 106368844 106445407 8065206 102583147 102594985 102621790 100826667 107830016 107791903
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