ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100791221	uncharacterized LOC100791221
gma-u.5	100792668	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
mtr-u.5	11435523	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
mtr-u.5	11439266	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ath-u.5	AT2G12646	PLATZ transcription factor family protein
ath-u.5	AT1G76590	PLATZ transcription factor family protein
bra-r.6	103853738	uncharacterized LOC103853738
vvi-u.5	100246080	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107911898	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107912180	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107918054	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
bna-r.1	106441926	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
bna-r.1	106376055	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
cit-r.1	102606851	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
cit-r.1	102616377	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
sly-u.5	101268014	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
sly-u.5	101268004	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
sly-u.5	101246472	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
sot-r.1	102599612	uncharacterized LOC102599612
sot-r.1	102593997	uncharacterized LOC102593997
sot-r.1	102600336	uncharacterized LOC102600336
nta-r.1	107798225	uncharacterized LOC107798225
nta-r.1	107793937	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
osa-u.5	4328449	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
osa-u.5	4323972	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
osa-u.5	4349481	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
zma-u.5	100276787	uncharacterized LOC100276787
zma-u.5	100277057	uncharacterized LOC100277057
zma-u.5	100277728	PLATZ transcription factor
tae-r.2	123162507	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
tae-r.2	123046628	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
hvu-r.1	123412350	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
hvu-r.1	123402929	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
sbi-r.1	110435101	uncharacterized LOC110435101
bdi-r.1	100836170	uncharacterized LOC100836170
bdi-r.1	100832335	uncharacterized LOC100832335
cre-r.1	CHLRE_16g650400v5	uncharacterized protein

Top 50 coexpressed genes to 100791221 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100791221 (gma-u.5 coexpression data)

CoexMap"18105177"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding

(777 genes)

IEA

Protein

XP_006375277.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, mito 1, plas 1, pero 1, mito_plas 1, cyto_E.R. 1

(predict for XP_006375277.2)

Subcellular
localization
TargetP

other 3, scret 3

(predict for XP_006375277.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100791221	gma-u.5 for 100792668	mtr-u.5 for 11435523	mtr-u.5 for 11439266	ath-u.5 for AT2G12646	ath-u.5 for AT1G76590	bra-r.6 for 103853738	vvi-u.5 for 100246080	ghi-r.1 for 107911898	ghi-r.1 for 107912180	ghi-r.1 for 107918054	bna-r.1 for 106441926	bna-r.1 for 106376055	cit-r.1 for 102606851	cit-r.1 for 102616377	sly-u.5 for 101268014	sly-u.5 for 101268004	sly-u.5 for 101246472	sot-r.1 for 102599612	sot-r.1 for 102593997	sot-r.1 for 102600336	nta-r.1 for 107798225	nta-r.1 for 107793937	osa-u.5 for 4328449	osa-u.5 for 4323972	osa-u.5 for 4349481	zma-u.5 for 100276787	zma-u.5 for 100277057	zma-u.5 for 100277728	tae-r.2 for 123162507	tae-r.2 for 123046628	hvu-r.1 for 123412350	hvu-r.1 for 123402929	sbi-r.1 for 110435101	bdi-r.1 for 100836170	bdi-r.1 for 100832335	cre-r.1 for CHLRE_16g650400v5

Ortholog

Ortholog ID: 82

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*