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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100783459   protein PHYTOCHROME KINASE SUBSTRATE 2 
 mtr-u.5   11408887   protein PHYTOCHROME KINASE SUBSTRATE 1 
 mtr-u.5   11409823   protein PHYTOCHROME KINASE SUBSTRATE 1 
 ath-u.5   PKS1   phytochrome kinase substrate 1 
 ath-u.5   PKS2   phytochrome kinase substrate 2 
 ath-u.5   AT1G18810   phytochrome kinase substrate-like protein 
 bra-r.6   103835883   protein PHYTOCHROME KINASE SUBSTRATE 3 
 bra-r.6   103875458   protein PHYTOCHROME KINASE SUBSTRATE 1 
 bra-r.6   103872121   protein PHYTOCHROME KINASE SUBSTRATE 2 
 vvi-u.5   104879773   protein PHYTOCHROME KINASE SUBSTRATE 1 
 vvi-u.5   104882316   protein PHYTOCHROME KINASE SUBSTRATE 3 
 ghi-r.1   107926637   protein PHYTOCHROME KINASE SUBSTRATE 1 
 ghi-r.1   107919139   protein PHYTOCHROME KINASE SUBSTRATE 1 
 ghi-r.1   107908450   protein PHYTOCHROME KINASE SUBSTRATE 1 
 bna-r.1   106407661   protein PHYTOCHROME KINASE SUBSTRATE 1 
 bna-r.1   125596211   protein PHYTOCHROME KINASE SUBSTRATE 1-like 
 bna-r.1   111199849   protein PHYTOCHROME KINASE SUBSTRATE 3-like 
 cit-r.1   102620637   protein PHYTOCHROME KINASE SUBSTRATE 3-like 
 cit-r.1   102618928   protein PHYTOCHROME KINASE SUBSTRATE 2 
 sly-u.5   101264929   protein PHYTOCHROME KINASE SUBSTRATE 1 
 sly-u.5   101267506   protein PHYTOCHROME KINASE SUBSTRATE 3 
 sly-u.5   101252996   protein PHYTOCHROME KINASE SUBSTRATE 3 
 sot-r.1   102580385   protein PHYTOCHROME KINASE SUBSTRATE 1 
 sot-r.1   102602807   protein PHYTOCHROME KINASE SUBSTRATE 3-like 
 nta-r.1   107760515   protein PHYTOCHROME KINASE SUBSTRATE 2-like 
 nta-r.1   107763302   protein PHYTOCHROME KINASE SUBSTRATE 1-like 
 nta-r.1   107813000   protein PHYTOCHROME KINASE SUBSTRATE 1-like 

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Top 50 coexpressed genes to 100783459 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100783459 (gma-u.5 coexpression data)

CoexMap"18105795"


ppoLOC18105795 | Entrez gene ID : 18105795    
Species gma mtr ath bra vvi ghi bna cit sly sot nta bdi osa tae ppo zma cre sbi hvu
Paralog 1 2 3 3 2 3 3 2 3 2 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009638 [list] [network] phototropism  (3 genes)  IEA  
GO CC
GO MF
Protein XP_006374469.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006374469.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006374469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100783459
mtr-u.5
for
11408887
mtr-u.5
for
11409823
ath-u.5
for
PKS1
ath-u.5
for
PKS2
ath-u.5
for
AT1G18810
bra-r.6
for
103835883
bra-r.6
for
103875458
bra-r.6
for
103872121
vvi-u.5
for
104879773
vvi-u.5
for
104882316
ghi-r.1
for
107926637
ghi-r.1
for
107919139
ghi-r.1
for
107908450
bna-r.1
for
106407661
bna-r.1
for
125596211
bna-r.1
for
111199849
cit-r.1
for
102620637
cit-r.1
for
102618928
sly-u.5
for
101264929
sly-u.5
for
101267506
sly-u.5
for
101252996
sot-r.1
for
102580385
sot-r.1
for
102602807
nta-r.1
for
107760515
nta-r.1
for
107763302
nta-r.1
for
107813000


Ortholog ID: 2971
Species gma gma gma mtr mtr ath ath ath bra bra bra vvi vvi ghi bna bna bna cit cit sly sly sly sot sot nta nta nta
Symbol LOC100783459 LOC100777748 LOC100811572 LOC11408887 LOC11409823 PKS1 PKS2 AT1G18810 LOC103875458 LOC103872121 LOC103853968 LOC104879773 LOC104882316 LOC107919139 LOC125596211 LOC106359344 LOC106438186 LOC102620637 LOC102618928 LOC101264929 LOC101267506 LOC101252996 LOC102580385 LOC102602807 LOC107763302 LOC107815731 LOC107823719
Function* protein PHYTOCHROME KINASE SUBSTRATE 2 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 1 phytochrome kinase substrate 1 phytochrome kinase substrate 2 phytochrome kinase substrate-like protein protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 2 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 3 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 1-like protein PHYTOCHROME KINASE SUBSTRATE 2-like protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 3-like protein PHYTOCHROME KINASE SUBSTRATE 2 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 3 protein PHYTOCHROME KINASE SUBSTRATE 3 protein PHYTOCHROME KINASE SUBSTRATE 1 protein PHYTOCHROME KINASE SUBSTRATE 3-like protein PHYTOCHROME KINASE SUBSTRATE 1-like protein PHYTOCHROME KINASE SUBSTRATE 3-like protein PHYTOCHROME KINASE SUBSTRATE 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00940 Phenylpropanoid biosynthesis 2
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
cit00071 Fatty acid degradation 2
cit01212 Fatty acid metabolism 2
cit04146 Peroxisome 2
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00062 Fatty acid elongation 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00910 Nitrogen metabolism 2
sly01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00905 Brassinosteroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100783459 100777748 100811572 11408887 11409823 814823 837989 838463 103875458 103872121 103853968 104879773 104882316 107919139 125596211 106359344 106438186 102620637 102618928 101264929 101267506 101252996 102580385 102602807 107763302 107815731 107823719
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