ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18107209	peroxidase 55
ppo-r.4	18107209	peroxidase 55
ppo-u.5	7461573	peroxidase 45
ppo-u.5	18101129	peroxidase 73
gma-u.5	100819937	peroxidase 50
gma-u.5	100791275	peroxidase 55
gma-u.5	100793327	peroxidase 16-like
mtr-u.5	11405719	peroxidase 73
mtr-u.5	11444192	peroxidase 16
mtr-u.5	11424137	peroxidase 51
ath-u.5	AT2G18980	Peroxidase superfamily protein
ath-u.5	RHS19	root hair specific 19
ath-u.5	AT5G14130	Peroxidase superfamily protein
bra-r.6	103861933	peroxidase 45
bra-r.6	103859221	peroxidase 50
vvi-u.5	100266458	peroxidase 73
ghi-r.1	107904826	peroxidase 55
ghi-r.1	107930837	peroxidase 16-like
ghi-r.1	107932531	peroxidase 73
bna-r.1	111201481	peroxidase 55
bna-r.1	106391590	peroxidase 50
bna-r.1	106431206	peroxidase 73-like
cit-r.1	102612835	peroxidase 55-like
cit-r.1	102610429	peroxidase 51-like
cit-r.1	102617468	peroxidase 16
sly-u.5	101244162	peroxidase 51
sly-u.5	101247048	peroxidase 45-like
sly-u.5	101257228	peroxidase 51
sot-r.1	102581043	peroxidase 16
sot-r.1	102578144	peroxidase 51
sot-r.1	102587234	peroxidase 51-like
nta-r.1	107759554	peroxidase 51
nta-r.1	107770948	peroxidase 16-like
nta-r.1	107775196	peroxidase 51-like
osa-u.5	4347520	peroxidase 73
osa-u.5	4342251	peroxidase 50
zma-u.5	100382459	Peroxidase 73
zma-u.5	103647239	peroxidase 50
zma-u.5	100216644	Peroxidase 73
tae-r.2	123052925	peroxidase 51
tae-r.2	123113412	peroxidase 35
tae-r.2	123105121	peroxidase 35
hvu-r.1	123426343	peroxidase 51-like
hvu-r.1	123409381	peroxidase 55-like
hvu-r.1	123452362	peroxidase 35-like
sbi-r.1	8060947	peroxidase 51
sbi-r.1	8086198	peroxidase 35
sbi-r.1	8054787	peroxidase 55
bdi-r.1	100846019	peroxidase 51
bdi-r.1	100839855	peroxidase 50
bdi-r.1	100824844	peroxidase 35

Top 50 coexpressed genes to 18107209 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18107209 (ppo-u.5 coexpression data)

CoexMap"18107209"

[Cytoscape]

Annotation

functional annotation

KEGG

pop00940 [list] [network] Phenylpropanoid biosynthesis (207 genes)

GO BP

GO:0042744 [list] [network] hydrogen peroxide catabolic process	(118 genes)	IEA
GO:0006979 [list] [network] response to oxidative stress	(196 genes)	IEA

GO CC

GO MF

GO:0004601 [list] [network] peroxidase activity	(141 genes)	IEA
GO:0020037 [list] [network] heme binding	(439 genes)	IEA

Protein

XP_006373205.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 2, extr 2, E.R._vacu 2

(predict for XP_006373205.1)

Subcellular
localization
TargetP

scret 6

(predict for XP_006373205.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18107209	ppo-r.4 for 18107209	ppo-u.5 for 7461573	ppo-u.5 for 18101129	gma-u.5 for 100819937	gma-u.5 for 100791275	gma-u.5 for 100793327	mtr-u.5 for 11405719	mtr-u.5 for 11444192	mtr-u.5 for 11424137	ath-u.5 for AT2G18980	ath-u.5 for RHS19	ath-u.5 for AT5G14130	bra-r.6 for 103861933	bra-r.6 for 103859221	vvi-u.5 for 100266458	ghi-r.1 for 107904826	ghi-r.1 for 107930837	ghi-r.1 for 107932531	bna-r.1 for 111201481	bna-r.1 for 106391590	bna-r.1 for 106431206	cit-r.1 for 102612835	cit-r.1 for 102610429	cit-r.1 for 102617468	sly-u.5 for 101244162	sly-u.5 for 101247048	sly-u.5 for 101257228	sot-r.1 for 102581043	sot-r.1 for 102578144	sot-r.1 for 102587234	nta-r.1 for 107759554	nta-r.1 for 107770948	nta-r.1 for 107775196	osa-u.5 for 4347520	osa-u.5 for 4342251	zma-u.5 for 100382459	zma-u.5 for 103647239	zma-u.5 for 100216644	tae-r.2 for 123052925	tae-r.2 for 123113412	tae-r.2 for 123105121	hvu-r.1 for 123426343	hvu-r.1 for 123409381	hvu-r.1 for 123452362	sbi-r.1 for 8060947	sbi-r.1 for 8086198	sbi-r.1 for 8054787	bdi-r.1 for 100846019	bdi-r.1 for 100839855	bdi-r.1 for 100824844

Ortholog

Ortholog ID: 615

Species

ppo

gma

mtr

ath

bra

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

RHS19

Function^*

peroxidase 55

peroxidase 45

peroxidase 73

peroxidase 16

peroxidase

peroxidase 51

peroxidase 73

peroxidase 51

peroxidase 45

Peroxidase superfamily protein

root hair specific 19

Peroxidase superfamily protein

peroxidase 50

peroxidase 45

peroxidase 55

peroxidase 16

peroxidase 50

peroxidase 73-like

peroxidase 50

peroxidase 55-like

peroxidase 51-like

peroxidase 16

peroxidase 51

peroxidase 16

peroxidase 51-like

peroxidase 51

peroxidase 16-like

peroxidase 73

peroxidase 35

peroxidase 50

Peroxidase 73

Peroxidase 55

peroxidase 55

peroxidase 51-like

peroxidase 35-like

peroxidase 55-like

peroxidase 51

peroxidase 35

peroxidase 55

peroxidase 51

peroxidase 50

peroxidase 35

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00052	Galactose metabolism	2
ppo00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2
ppo00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	7
gma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00941	Flavonoid biosynthesis	4
mtr00940	Phenylpropanoid biosynthesis	2
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	7
ath00053	Ascorbate and aldarate metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath02010	ABC transporters	3
ath04981	Folate transport and metabolism	3
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04142	Lysosome	2
bra04145	Phagosome	2
bra03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	4
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	3
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	6
cit00996	Biosynthesis of various alkaloids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	2
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	7
sly04075	Plant hormone signal transduction	4
sly00520	Amino sugar and nucleotide sugar metabolism	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00910	Nitrogen metabolism	2
sot02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00630	Glyoxylate and dicarboxylate metabolism	3
osa01200	Carbon metabolism	3
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3
zma00100	Steroid biosynthesis	2
zma00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	6
tae04141	Protein processing in endoplasmic reticulum	6
tae04145	Phagosome	6
tae00100	Steroid biosynthesis	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	4
hvu00630	Glyoxylate and dicarboxylate metabolism	3
hvu00710	Carbon fixation by Calvin cycle	3
hvu00380	Tryptophan metabolism	2
hvu00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	3
sbi00500	Starch and sucrose metabolism	3
sbi00999	Biosynthesis of various plant secondary metabolites	3
sbi00053	Ascorbate and aldarate metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00910	Nitrogen metabolism	2
bdi01310	Nitrogen cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00710	Carbon fixation by Calvin cycle	4
bdi01200	Carbon metabolism	4
bdi00630	Glyoxylate and dicarboxylate metabolism	3
bdi00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	3
bdi00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

18107209

7461573

18101129

100804620

100807430

100815654

11405719

11424137

25481868

816415

836876

831263

103859221

103852874

103846507

107904826

107957038

121231926

106391590

106441230

106407007

102612835

102610429

102617468

101244162

101257228

101267754

102581043

102587234

102592844

107770948

107777026

107790131

4347520

4334201

103647239

100216644

100191304

123104317

123152420

123162898

123426343

123452362

123399792

8060947

8086198

8054787

100846019

100839855

100824844

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	1	3	3	3	3	3	3	2	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18107209 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18107209 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**