ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18107561	L-arabinokinase
gma-u.5	100787860	L-arabinokinase
gma-u.5	100306164	arabinokinase-like protein
mtr-u.5	11425676	L-arabinokinase
ath-u.5	ARA1	arabinose kinase
vvi-u.5	100258651	L-arabinokinase
vvi-u.5	100267958	L-arabinokinase
sly-u.5	101256102	L-arabinokinase-like
sly-u.5	101245341	L-arabinokinase-like
osa-u.5	4341977	L-arabinokinase
osa-u.5	4328266	L-arabinokinase
zma-u.5	103626414	L-arabinokinase
zma-u.5	103654924	L-arabinokinase

functional annotation

KEGG

pop00520 [list] [network] Amino sugar and nucleotide sugar metabolism (156 genes)

pop01250 [list] [network] Biosynthesis of nucleotide sugars (115 genes)

GO BP

GO CC

GO MF

GO:0005524 [list] [network] ATP binding

(2559 genes)

IEA

Protein

XP_052304882.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 3, chlo 2, E.R._vacu 2, E.R. 1, pero 1, chlo_mito 1

(predict for XP_052304882.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for XP_052304882.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18107561	gma-u.5 for 100787860	gma-u.5 for 100306164	mtr-u.5 for 11425676	ath-u.5 for ARA1	vvi-u.5 for 100258651	vvi-u.5 for 100267958	sly-u.5 for 101256102	sly-u.5 for 101245341	osa-u.5 for 4341977	osa-u.5 for 4328266	zma-u.5 for 103626414	zma-u.5 for 103654924

Ortholog ID: 4249

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ARA1

Function^*

L-arabinokinase

arabinokinase-like protein

L-arabinokinase

arabinose kinase

L-arabinokinase

L-arabinokinase-like

L-arabinokinase

L-arabinokinase-like

L-arabinokinase

L-arabinokinase-like

L-arabinokinase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00280	Valine, leucine and isoleucine degradation	3
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo00511	Other glycan degradation	2
ppo00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2
gma00260	Glycine, serine and threonine metabolism	2
gma00410	beta-Alanine metabolism	2
gma00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00071	Fatty acid degradation	5
gma00592	alpha-Linolenic acid metabolism	4
gma01212	Fatty acid metabolism	4
gma00280	Valine, leucine and isoleucine degradation	3
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	3
mtr01200	Carbon metabolism	2
mtr00100	Steroid biosynthesis	2
mtr00561	Glycerolipid metabolism	2
mtr00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	6
ath00071	Fatty acid degradation	6
ath01212	Fatty acid metabolism	6
ath00630	Glyoxylate and dicarboxylate metabolism	4
ath00592	alpha-Linolenic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00071	Fatty acid degradation	5
vvi00280	Valine, leucine and isoleucine degradation	4
vvi01212	Fatty acid metabolism	4
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	9
ghi00280	Valine, leucine and isoleucine degradation	9
ghi00380	Tryptophan metabolism	6
ghi00630	Glyoxylate and dicarboxylate metabolism	5
ghi04146	Peroxisome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	5
ghi00592	alpha-Linolenic acid metabolism	5
ghi01212	Fatty acid metabolism	5
ghi00280	Valine, leucine and isoleucine degradation	5
ghi00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna00280	Valine, leucine and isoleucine degradation	3
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00071	Fatty acid degradation	5
sly01200	Carbon metabolism	5
sly00310	Lysine degradation	4
sly01212	Fatty acid metabolism	4
sly00280	Valine, leucine and isoleucine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00071	Fatty acid degradation	2
sot00280	Valine, leucine and isoleucine degradation	2
sot01212	Fatty acid metabolism	2
sot04146	Peroxisome	2
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00410	beta-Alanine metabolism	3
osa00640	Propanoate metabolism	3
osa00280	Valine, leucine and isoleucine degradation	2
osa01200	Carbon metabolism	2
osa00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	5
zma00071	Fatty acid degradation	4
zma00592	alpha-Linolenic acid metabolism	4
zma01212	Fatty acid metabolism	4
zma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	7
tae00052	Galactose metabolism	4
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae01250	Biosynthesis of nucleotide sugars	4
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	7
sbi03460	Fanconi anemia pathway	3
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi03420	Nucleotide excision repair	2
sbi03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	6
bdi00640	Propanoate metabolism	3
bdi00520	Amino sugar and nucleotide sugar metabolism	3
bdi00785	Lipoic acid metabolism	2
bdi01210	2-Oxocarboxylic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

18107561

100787860

100306164

11425676

827299

103870085

103845043

100258651

100267958

107961691

107894141

106371362

106406195

102620473

101245341

101256102

102582665

102592998

107771004

107799186

4328266

4341977

103654924

103626414

123132207

123157304

123401565

123407561

8069954

8063838

100825162

100827295

5717431

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18107561 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18107561 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	1	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18107561 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18107561 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**