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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18107896   vacuolar protein sorting-associated protein 26B 
 ppo-r.4   18107896   vacuolar protein sorting-associated protein 26B 
 ppo-u.5   7488176   vacuolar protein sorting-associated protein 26A 
 ppo-u.5   18094945   vacuolar protein sorting-associated protein 26A 
 ppo-u.5   7487240   vacuolar protein sorting-associated protein 26B 
 gma-u.5   100813795   vacuolar protein sorting-associated protein 26A 
 gma-u.5   100813307   vacuolar protein sorting-associated protein 26A 
 gma-u.5   100788855   vacuolar protein sorting-associated protein 26-like 
 mtr-u.5   25500380   vacuolar protein sorting-associated protein 26B 
 mtr-u.5   25488835   vacuolar protein sorting-associated protein 26A 
 ath-u.5   VPS26B   vacuolar protein sorting 26B 
 ath-u.5   VPS26A   vacuolar protein sorting 26A 
 bra-r.6   103852026   vacuolar protein sorting-associated protein 26A 
 bra-r.6   103867546   vacuolar protein sorting-associated protein 26B 
 bra-r.6   103844828   vacuolar protein sorting-associated protein 26A 
 vvi-u.5   100250336   vacuolar protein sorting-associated protein 26A 
 vvi-u.5   100246120   vacuolar protein sorting-associated protein 26B 
 ghi-r.1   107891477   vacuolar protein sorting-associated protein 26A 
 ghi-r.1   107929612   vacuolar protein sorting-associated protein 26A 
 ghi-r.1   107930185   vacuolar protein sorting-associated protein 26A 
 bna-r.1   106371289   vacuolar protein sorting-associated protein 26A-like 
 bna-r.1   106418473   vacuolar protein sorting-associated protein 26A-like 
 bna-r.1   106402497   vacuolar protein sorting-associated protein 26B 
 cit-r.1   102627912   vacuolar protein sorting-associated protein 26A 
 sly-u.5   101247715   vacuolar protein sorting-associated protein 26A 
 sot-r.1   102577746   vacuolar protein sorting-associated protein 26-like protein 
 nta-r.1   107795417   vacuolar protein sorting-associated protein 26A 
 nta-r.1   107828108   vacuolar protein sorting-associated protein 26A-like 
 osa-u.5   4350961   vacuolar protein sorting-associated protein 26A 
 osa-u.5   4352271   vacuolar protein sorting-associated protein 26A 
 zma-u.5   100193449   vacuolar protein sorting 26 
 zma-u.5   100282332   uncharacterized LOC100282332 
 tae-r.2   123086144   vacuolar protein sorting-associated protein 26A 
 tae-r.2   123096950   vacuolar protein sorting-associated protein 26A 
 tae-r.2   123172597   vacuolar protein sorting-associated protein 26A 
 hvu-r.1   123448358   vacuolar protein sorting-associated protein 26A-like 
 sbi-r.1   8064101   vacuolar protein sorting-associated protein 26A 
 bdi-r.1   100825760   vacuolar protein sorting-associated protein 26A 
 bdi-r.1   100829932   vacuolar protein sorting-associated protein 26A 
 cre-r.1   CHLRE_09g414200v5   uncharacterized protein 

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Top 50 coexpressed genes to 18107896 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18107896 (ppo-u.5 coexpression data)

CoexMap"18107896"


ppoLOC18107896 | Entrez gene ID : 18107896    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 3 2 3 3 1 1 1 2 2 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04144 [list] [network] Endocytosis (195 genes)
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (26 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0030904 [list] [network] retromer complex  (9 genes)  IEA  
GO:0005768 [list] [network] endosome  (204 genes)  IEA  
GO MF
Protein XP_006372264.2 [sequence] [blastp]
XP_024446488.2 [sequence] [blastp]
XP_024446489.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_006372264.2)
cyto 4,  chlo 3,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_024446488.2)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_024446489.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_006372264.2)
chlo 4,  other 4  (predict for XP_024446488.2)
scret 3,  other 3,  mito 3  (predict for XP_024446489.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18107896
ppo-r.4
for
18107896
ppo-u.5
for
7488176
ppo-u.5
for
18094945
ppo-u.5
for
7487240
gma-u.5
for
100813795
gma-u.5
for
100813307
gma-u.5
for
100788855
mtr-u.5
for
25500380
mtr-u.5
for
25488835
ath-u.5
for
VPS26B
ath-u.5
for
VPS26A
bra-r.6
for
103852026
bra-r.6
for
103867546
bra-r.6
for
103844828
vvi-u.5
for
100250336
vvi-u.5
for
100246120
ghi-r.1
for
107891477
ghi-r.1
for
107929612
ghi-r.1
for
107930185
bna-r.1
for
106371289
bna-r.1
for
106418473
bna-r.1
for
106402497
cit-r.1
for
102627912
sly-u.5
for
101247715
sot-r.1
for
102577746
nta-r.1
for
107795417
nta-r.1
for
107828108
osa-u.5
for
4350961
osa-u.5
for
4352271
zma-u.5
for
100193449
zma-u.5
for
100282332
tae-r.2
for
123086144
tae-r.2
for
123096950
tae-r.2
for
123172597
hvu-r.1
for
123448358
sbi-r.1
for
8064101
bdi-r.1
for
100825760
bdi-r.1
for
100829932
cre-r.1
for
CHLRE_09g414200v5


Ortholog ID: 3608
Species ppo ppo ppo gma gma gma mtr mtr ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC7488176 LOC18094945 LOC7487240 LOC100813795 LOC100813307 LOC100788855 LOC25500380 LOC25488835 VPS26B VPS26A LOC103852026 LOC103867546 LOC103844828 LOC100250336 LOC100246120 LOC107891477 LOC107929612 LOC107930185 LOC106418473 LOC106390638 LOC106380963 LOC102627912 LOC101247715 LOC102577746 LOC107795417 LOC107828108 LOC4350961 LOC4352271 LOC100193449 LOC100282332 LOC123086144 LOC123096950 LOC123172597 LOC123448358 LOC8064101 LOC100825760 LOC100829932 CHLRE_09g414200v5
Function* vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26-like vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting 26B vacuolar protein sorting 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26-like protein vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting 26 uncharacterized LOC100282332 vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04142 Lysosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04142 Lysosome 3
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04130 SNARE interactions in vesicular transport 3
vvi00190 Oxidative phosphorylation 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi00051 Fructose and mannose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 6
ghi04144 Endocytosis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 12
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot03040 Spliceosome 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00510 N-Glycan biosynthesis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi00190 Oxidative phosphorylation 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre04145 Phagosome 3
cre04148 Efferocytosis 2
cre00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7488176 18094945 7487240 100813795 100813307 100788855 25500380 25488835 828883 835435 103852026 103867546 103844828 100250336 100246120 107891477 107929612 107930185 106418473 106390638 106380963 102627912 101247715 102577746 107795417 107828108 4350961 4352271 100193449 100282332 123086144 123096950 123172597 123448358 8064101 100825760 100829932 5722342
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