ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7480507	protein SRG1
gma-u.5	100793145	codeine O-demethylase-like
gma-u.5	100799195	codeine O-demethylase-like
gma-u.5	100802232	codeine O-demethylase
mtr-u.5	11446682	protein SRG1
mtr-u.5	11418222	codeine O-demethylase
mtr-u.5	11438671	2-oxoglutarate-dependent dioxygenase 11
ath-u.5	AT5G20400	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
ath-u.5	AT5G20550	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
bra-r.6	103851996	protein SRG1
bra-r.6	103856445	flavonol synthase/flavanone 3-hydroxylase
vvi-u.5	100249729	protein SRG1
vvi-u.5	100247195	protein SRG1
vvi-u.5	100242056	protein SRG1
ghi-r.1	107905275	protein SRG1
bna-r.1	106439500	codeine O-demethylase-like
bna-r.1	106385743	protein SRG1-like
bna-r.1	111213584	protein SRG1-like
cit-r.1	102624868	protein SRG1-like
cit-r.1	102628927	flavonol synthase 1-like
cit-r.1	102631277	codeine O-demethylase-like
sly-u.5	101261126	protein SRG1-like
sly-u.5	101258320	protein LATERAL BRANCHING OXIDOREDUCTASE 1
sly-u.5	101252129	protein LATERAL BRANCHING OXIDOREDUCTASE 1
sot-r.1	102601070	protein SRG1-like
sot-r.1	102588798	codeine O-demethylase-like
nta-r.1	107784809	protein LATERAL BRANCHING OXIDOREDUCTASE 1
nta-r.1	107789723	protein LATERAL BRANCHING OXIDOREDUCTASE 1
osa-u.5	4329022	protein SRG1
osa-u.5	4329166	protein LATERAL BRANCHING OXIDOREDUCTASE 1
zma-u.5	100285776	leucoanthocyanidin dioxygenase
zma-u.5	100281145	uncharacterized LOC100281145
tae-r.2	123151557	protein SRG1
tae-r.2	123121640	protein SRG1
hvu-r.1	123408036	protein SRG1-like
sbi-r.1	8067657	protein SRG1
sbi-r.1	8070223	protein SRG1
bdi-r.1	100835818	protein SRG1
bdi-r.1	100835002	protein SRG1-like
bdi-r.1	100834695	protein SRG1

Top 50 coexpressed genes to 7480507 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7480507 (ppo-u.5 coexpression data)

CoexMap"18111058"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_052305115.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 2, cysk_nucl 2

(predict for XP_052305115.1)

Subcellular
localization
TargetP

other 8

(predict for XP_052305115.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7480507	gma-u.5 for 100793145	gma-u.5 for 100799195	gma-u.5 for 100802232	mtr-u.5 for 11446682	mtr-u.5 for 11418222	mtr-u.5 for 11438671	ath-u.5 for AT5G20400	ath-u.5 for AT5G20550	bra-r.6 for 103851996	bra-r.6 for 103856445	vvi-u.5 for 100249729	vvi-u.5 for 100247195	vvi-u.5 for 100242056	ghi-r.1 for 107905275	bna-r.1 for 106439500	bna-r.1 for 106385743	bna-r.1 for 111213584	cit-r.1 for 102624868	cit-r.1 for 102628927	cit-r.1 for 102631277	sly-u.5 for 101261126	sly-u.5 for 101258320	sly-u.5 for 101252129	sot-r.1 for 102601070	sot-r.1 for 102588798	nta-r.1 for 107784809	nta-r.1 for 107789723	osa-u.5 for 4329022	osa-u.5 for 4329166	zma-u.5 for 100285776	zma-u.5 for 100281145	tae-r.2 for 123151557	tae-r.2 for 123121640	hvu-r.1 for 123408036	sbi-r.1 for 8067657	sbi-r.1 for 8070223	bdi-r.1 for 100835818	bdi-r.1 for 100835002	bdi-r.1 for 100834695

Ortholog

Ortholog ID: 469

Species

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

codeine O-demethylase-like

codeine O-demethylase

2-oxoglutarate-dependent dioxygenase 11

protein SRG1

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

protein SRG1

flavonol synthase/flavanone 3-hydroxylase

codeine O-demethylase

protein SRG1

protein SRG1-like

protein SRG1

codeine O-demethylase-like

protein SRG1-like

flavonol synthase 1-like

protein SRG1-like

protein LATERAL BRANCHING OXIDOREDUCTASE 1

protein SRG1-like

codeine O-demethylase-like

protein SRG1-like

protein LATERAL BRANCHING OXIDOREDUCTASE 1

protein SRG1

protein LATERAL BRANCHING OXIDOREDUCTASE 1

leucoanthocyanidin dioxygenase

uncharacterized LOC100281145

2-oxoglutarate-dependent dioxygenase 11-like

protein SRG1-like

codeine O-demethylase-like

protein SRG1

protein SRG1-like

protein SRG1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	2
gma00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	3
mtr00500	Starch and sucrose metabolism	3
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00061	Fatty acid biosynthesis	2
mtr00071	Fatty acid degradation	2
mtr01212	Fatty acid metabolism	2
mtr04146	Peroxisome	2
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00270	Cysteine and methionine metabolism	3
bra00543	Exopolysaccharide biosynthesis	2
bra00920	Sulfur metabolism	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	4
vvi00310	Lysine degradation	2
vvi00071	Fatty acid degradation	2
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	5
vvi01200	Carbon metabolism	3
vvi01230	Biosynthesis of amino acids	3
vvi00051	Fructose and mannose metabolism	3
vvi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00908	Zeatin biosynthesis	3
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	2
cit00230	Purine metabolism	2
cit00330	Arginine and proline metabolism	2
cit00360	Phenylalanine metabolism	2
cit00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	6
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
cit01230	Biosynthesis of amino acids	4
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00620	Pyruvate metabolism	2
sly00640	Propanoate metabolism	2
sly01200	Carbon metabolism	2
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2
sly00232	Caffeine metabolism	2
sly01232	Nucleotide metabolism	2
sly04146	Peroxisome	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00071	Fatty acid degradation	5
sot01212	Fatty acid metabolism	5
sot01200	Carbon metabolism	4
sot00592	alpha-Linolenic acid metabolism	4
sot04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	4
sot04626	Plant-pathogen interaction	4
sot00010	Glycolysis / Gluconeogenesis	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	6
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	3
hvu04981	Folate transport and metabolism	2
hvu00230	Purine metabolism	2
hvu01232	Nucleotide metabolism	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

100793145

100799195

100802232

11418222

11438671

11443553

832162

841362

103851996

103856445

103845680

100249729

100242056

100250663

107905275

106439500

106385743

111213584

102624868

102628927

101261126

101252129

102601070

102588798

107062634

107784809

107789723

4329022

4340290

9266216

100285776

100281145

123163650

123398224

123413248

8067657

8070223

100835002

100834695

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	3	3	2	2	3	1	3	3	3	2	2	2	2	2	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7480507 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480507 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**