ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18111077	translocase of chloroplast 90, chloroplastic
ppo-r.4	18111077	translocase of chloroplast 90, chloroplastic
ppo-u.5	18101787	translocase of chloroplast 159, chloroplastic
ppo-u.5	18099911	translocase of chloroplast 90, chloroplastic
ppo-u.5	18101786	translocase of chloroplast 159, chloroplastic
gma-u.5	100810931	translocase of chloroplast 120, chloroplastic
gma-u.5	100807107	translocase of chloroplast 159, chloroplastic
gma-u.5	100805258	translocase of chloroplast 90, chloroplastic
mtr-u.5	11422615	translocase of chloroplast 159, chloroplastic
mtr-u.5	11415941	translocase of chloroplast 120, chloroplastic
ath-u.5	TOC132	multimeric translocon complex in the outer envelope membrane 132
ath-u.5	TOC120	translocon outer complex protein 120
ath-u.5	TOC159	translocon at the outer envelope membrane of chloroplasts 159
vvi-u.5	100266571	translocase of chloroplast 159, chloroplastic
vvi-u.5	100266108	translocase of chloroplast 90, chloroplastic
vvi-u.5	100262391	translocase of chloroplast 120, chloroplastic
sly-u.5	101248612	translocase of chloroplast 159, chloroplastic
sly-u.5	101258108	translocase of chloroplast 120, chloroplastic
sly-u.5	101258595	translocase of chloroplast 159, chloroplastic
osa-u.5	4351723	translocase of chloroplast 90, chloroplastic
osa-u.5	4349303	translocase of chloroplast 132, chloroplastic
osa-u.5	4337834	translocase of chloroplast 101, chloroplastic
zma-u.5	100281578	chloroplast outer envelope protein 86
zma-u.5	103635889	translocase of chloroplast 159, chloroplastic
zma-u.5	103637626	translocase of chloroplast 120, chloroplastic

Top 50 coexpressed genes to 18111077 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18111077 (ppo-u.5 coexpression data)

CoexMap"18111077"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045036 [list] [network] protein targeting to chloroplast

(20 genes)

IEA

GO CC

GO:0009707 [list] [network] chloroplast outer membrane

(44 genes)

IEA

GO MF

GO:0003924 [list] [network] GTPase activity	(264 genes)	IEA
GO:0005525 [list] [network] GTP binding	(290 genes)	IEA

Protein

XP_006389429.1 [sequence] [blastp]
XP_052304944.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1	(predict for XP_006389429.1)
chlo 3, nucl 3, golg 2, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1	(predict for XP_052304944.1)

Subcellular
localization
TargetP

mito 4	(predict for XP_006389429.1)
chlo 4, other 4	(predict for XP_052304944.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18111077	ppo-r.4 for 18111077	ppo-u.5 for 18101787	ppo-u.5 for 18099911	ppo-u.5 for 18101786	gma-u.5 for 100810931	gma-u.5 for 100807107	gma-u.5 for 100805258	mtr-u.5 for 11422615	mtr-u.5 for 11415941	ath-u.5 for TOC132	ath-u.5 for TOC120	ath-u.5 for TOC159	vvi-u.5 for 100266571	vvi-u.5 for 100266108	vvi-u.5 for 100262391	sly-u.5 for 101248612	sly-u.5 for 101258108	sly-u.5 for 101258595	osa-u.5 for 4351723	osa-u.5 for 4349303	osa-u.5 for 4337834	zma-u.5 for 100281578	zma-u.5 for 103635889	zma-u.5 for 103637626

Ortholog

Ortholog ID: 663

Species

ppo

gma

mtr

ath

bra

vvi

ghi

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

TOC159

TOC132

Function^*