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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18111182   uncharacterized LOC18111182 
 ppo-r.4   18111182   uncharacterized LOC18111182 
 gma-u.5   100817864   50S ribosomal protein L27 
 gma-u.5   100782419   50S ribosomal protein L27-like 
 mtr-u.5   11420362   50S ribosomal protein L27 
 ath-u.5   AT2G16930   Ribosomal protein L27 family protein 
 ath-u.5   AT5G15220   Ribosomal protein L27 family protein 
 vvi-u.5   100853593   uncharacterized LOC100853593 
 sly-u.5   101251545   uncharacterized LOC101251545 
 sly-u.5   101257990   uncharacterized LOC101257990 
 osa-u.5   9271228   uncharacterized LOC9271228 
 osa-u.5   4345523   uncharacterized LOC4345523 
 osa-u.5   4335476   uncharacterized LOC4335476 
 zma-u.5   101027115   50S ribosomal protein L27 

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Top 50 coexpressed genes to 18111182 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18111182 (ppo-u.5 coexpression data)

CoexMap"18111182"


ppoLOC18111182 | Entrez gene ID : 18111182    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 2 1 2 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_006389548.1 [sequence] [blastp]
XP_024453298.1 [sequence] [blastp]
XP_052307351.1 [sequence] [blastp]
XP_052307352.1 [sequence] [blastp]
XP_052307353.1 [sequence] [blastp]
XP_052307354.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 10  (predict for XP_006389548.1)
cyto 10  (predict for XP_024453298.1)
cyto 10  (predict for XP_052307351.1)
cyto 10  (predict for XP_052307352.1)
cyto 10  (predict for XP_052307353.1)
cyto 10  (predict for XP_052307354.1)
Subcellular
localization
TargetP
other 4  (predict for XP_006389548.1)
other 4  (predict for XP_024453298.1)
other 4  (predict for XP_052307351.1)
other 4  (predict for XP_052307352.1)
other 4  (predict for XP_052307353.1)
other 4  (predict for XP_052307354.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18111182

.
ppo-r.4
for
18111182

.
gma-u.5
for
100817864

.
gma-u.5
for
100782419

.
mtr-u.5
for
11420362

.
ath-u.5
for
AT2G16930

.
ath-u.5
for
AT5G15220

.
vvi-u.5
for
100853593

.
sly-u.5
for
101251545

.
sly-u.5
for
101257990

.
osa-u.5
for
9271228

.
osa-u.5
for
4345523

.
osa-u.5
for
4335476

.
zma-u.5
for
101027115

.


Ortholog ID: 4859
Species ath ath gma gma sly sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi nta nta
Symbol AT2G16930 AT5G15220 LOC100782419 LOC100817864 LOC101257990 LOC101251545 LOC4335476 LOC4345523 LOC101027115 LOC103846430 LOC103850976 LOC100853593 LOC18111182 LOC11420362 LOC123069505 LOC123049305 LOC123426443 LOC107917907 LOC107922305 LOC106385940 LOC106372143 LOC8067522 LOC8071153 LOC102587654 LOC102591378 LOC102610058 LOC100846430 LOC107774209 LOC107828233
Function* Ribosomal protein L27 family protein Ribosomal protein L27 family protein 50S ribosomal protein L27-like 50S ribosomal protein L27 uncharacterized LOC101257990 uncharacterized LOC101251545 uncharacterized LOC4335476 uncharacterized LOC4345523 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27 uncharacterized LOC100853593 uncharacterized LOC18111182 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27-like 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27-like 50S ribosomal protein L27 50S ribosomal protein L27 50S ribosomal protein L27-like 50S ribosomal protein L27-like uncharacterized LOC102610058 50S ribosomal protein L27 uncharacterized LOC107774209 uncharacterized LOC107828233
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03050 Proteasome 4
gma03040 Spliceosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03020 RNA polymerase 3
sly03420 Nucleotide excision repair 3
sly03010 Ribosome 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00300 Lysine biosynthesis 2
sly01230 Biosynthesis of amino acids 2
sly00280 Valine, leucine and isoleucine degradation 2
sly00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra00190 Oxidative phosphorylation 3
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00220 Arginine biosynthesis 4
tae00240 Pyrimidine metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi03010 Ribosome 3
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi03010 Ribosome 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03018 RNA degradation 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03040 Spliceosome 4
nta03018 RNA degradation 3
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816196 831374 100782419 100817864 101257990 101251545 4335476 4345523 101027115 103846430 103850976 100853593 18111182 11420362 123069505 123049305 123426443 107917907 107922305 106385940 106372143 8067522 8071153 102587654 102591378 102610058 100846430 107774209 107828233
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