ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25482016	egalitarian protein homolog
mtr-r.5	25482016	egalitarian protein homolog
gma-u.5	100810098	piRNA biogenesis protein EXD1
gma-u.5	100794813	piRNA biogenesis protein EXD1
gma-u.5	100788577	egalitarian protein homolog
ppo-u.5	7462279	uncharacterized LOC7462279
ppo-u.5	7467941	uncharacterized LOC7467941
ath-u.5	AT2G25910	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein
vvi-u.5	100259526	uncharacterized LOC100259526
vvi-u.5	100263418	uncharacterized LOC100263418
sly-u.5	101268424	uncharacterized LOC101268424
sly-u.5	101267726	uncharacterized LOC101267726
sly-u.5	101249716	uncharacterized LOC101249716
osa-u.5	4326337	uncharacterized LOC4326337
zma-u.5	100273227	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein
zma-u.5	100276743	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein

Annotation

functional annotation

KEGG

GO BP

GO:0006139 [list] [network] nucleobase-containing compound metabolic process

(2298 genes)

IEA

GO CC

GO MF

GO:0008408 [list] [network] 3'-5' exonuclease activity	(75 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1400 genes)	IEA

Protein

XP_013465924.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 2, nucl 1, extr 1

(predict for XP_013465924.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013465924.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25482016	mtr-r.5 for 25482016	gma-u.5 for 100810098	gma-u.5 for 100794813	gma-u.5 for 100788577	ppo-u.5 for 7462279	ppo-u.5 for 7467941	ath-u.5 for AT2G25910	vvi-u.5 for 100259526	vvi-u.5 for 100263418	sly-u.5 for 101268424	sly-u.5 for 101267726	sly-u.5 for 101249716	osa-u.5 for 4326337	zma-u.5 for 100273227	zma-u.5 for 100276743

Ortholog

Ortholog ID: 5066

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

egalitarian protein homolog

uncharacterized LOC7462279

uncharacterized LOC7467941

3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein

piRNA biogenesis protein EXD1

uncharacterized LOC100259526

uncharacterized LOC100263418

egalitarian protein homolog

piRNA biogenesis protein EXD1

hypothetical protein

uncharacterized LOC102614097

uncharacterized LOC101267726

uncharacterized LOC101249716

ribonuclease D-like

uncharacterized LOC102600946

uncharacterized LOC107789383

uncharacterized LOC107830681

uncharacterized LOC4326337

3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein

piRNA biogenesis protein EXD1

egalitarian protein homolog

uncharacterized LOC8078192

uncharacterized LOC100838477

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4
gma03060	Protein export	3
gma00510	N-Glycan biosynthesis	3
gma00513	Various types of N-glycan biosynthesis	3
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	5
ppo04141	Protein processing in endoplasmic reticulum	5
ppo03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04070	Phosphatidylinositol signaling system	3
bra04075	Plant hormone signal transduction	3
bra04626	Plant-pathogen interaction	3
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna00920	Sulfur metabolism	2
bna04122	Sulfur relay system	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna00920	Sulfur metabolism	2
bna04122	Sulfur relay system	2
bna04075	Plant hormone signal transduction	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01210	2-Oxocarboxylic acid metabolism	3
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2
sot00190	Oxidative phosphorylation	2
sot00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00280	Valine, leucine and isoleucine degradation	2
tae00410	beta-Alanine metabolism	2
tae00640	Propanoate metabolism	2
tae01200	Carbon metabolism	2
tae00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	3
bdi03083	Polycomb repressive complex	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

25482016

100788577

7462279

7467941

817132

103864704

100259526

100263418

107906985

106401906

106446798

102615602

102614097

101267726

101249716

102600317

102600946

107789383

107830681

4326337

100276743

100273227

123078409

123061337

123443692

8078192

100838477

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25482016 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25482016 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	2	3	2	1	2	3	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25482016 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25482016 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**