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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482152   FACT complex subunit SSRP1 
 mtr-r.5   25482152   FACT complex subunit SSRP1 
 mtr-u.5   11421264   FACT complex subunit SSRP1 
 gma-u.5   100805034   FACT complex subunit SSRP1 
 gma-u.5   100780190   FACT complex subunit SSRP1 
 ppo-u.5   7472609   FACT complex subunit SSRP1 
 ppo-u.5   7482452   FACT complex subunit SSRP1 
 ath-u.5   HMG   high mobility group 
 vvi-u.5   100249277   FACT complex subunit SSRP1 
 sly-u.5   101259798   FACT complex subunit SSRP1 
 osa-u.5   4325652   FACT complex subunit SSRP1-A-like 
 osa-u.5   4337994   FACT complex subunit SSRP1-B-like 
 zma-u.5   542007   SSRP1 protein 
 zma-u.5   103630072   FACT complex subunit SSRP1-B 

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Top 50 coexpressed genes to 25482152 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25482152 (mtr-u.5 coexpression data)

CoexMap"25482152"


mtrLOC25482152 | Entrez gene ID : 25482152      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0035101 [list] [network] FACT complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (27 genes)  IEA  
GO:0042393 [list] [network] histone binding  (53 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013466118.1 [sequence] [blastp]
XP_024631167.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_013466118.1)
nucl 8,  cyto 2  (predict for XP_024631167.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013466118.1)
other 8  (predict for XP_024631167.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482152

.
mtr-r.5
for
25482152

.
mtr-u.5
for
11421264

.
gma-u.5
for
100805034

.
gma-u.5
for
100780190

.
ppo-u.5
for
7472609

.
ppo-u.5
for
7482452

.
ath-u.5
for
HMG

.
vvi-u.5
for
100249277

.
sly-u.5
for
101259798

.
osa-u.5
for
4325652

.
osa-u.5
for
4337994

.
zma-u.5
for
542007

.
zma-u.5
for
103630072

.


Ortholog ID: 4395
Species ath gma gma sly osa osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol HMG LOC100780190 LOC100805034 LOC101259798 LOC4325652 LOC4337994 LOC542007 LOC103875134 LOC103854188 LOC100249277 LOC7482452 LOC7472609 LOC11421264 LOC25482152 LOC123068950 LOC123077475 LOC123427125 LOC107924261 LOC107892338 LOC125606444 LOC106371129 CHLRE_01g029450v5 LOC8080975 LOC8084374 LOC102593838 LOC102594303 LOC102622679 LOC100836453 LOC100822727 LOC107761723 LOC107808145
Function* high mobility group FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1-A-like FACT complex subunit SSRP1-B-like SSRP1 protein FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1-A FACT complex subunit SSRP1-A FACT complex subunit SSRP1-B-like FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 FACT complex subunit SSRP1 uncharacterized protein FACT complex subunit SSRP1-B FACT complex subunit SSRP1 FACT complex subunit SSRP1-like FACT complex subunit SSRP1-like FACT complex subunit SSRP1 FACT complex subunit SSRP1-B FACT complex subunit SSRP1-A FACT complex subunit SSRP1 FACT complex subunit SSRP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 3
ath04120 Ubiquitin mediated proteolysis 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03083 Polycomb repressive complex 2
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 4
ghi03030 DNA replication 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
cre03013 Nucleocytoplasmic transport 2
cre03040 Spliceosome 2
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03050 Proteasome 2
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822505 100780190 100805034 101259798 4325652 4337994 542007 103875134 103854188 100249277 7482452 7472609 11421264 25482152 123068950 123077475 123427125 107924261 107892338 125606444 106371129 5715346 8080975 8084374 102593838 102594303 102622679 100836453 100822727 107761723 107808145
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