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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482568   RNA-dependent RNA polymerase 1 
 mtr-r.5   25482568   RNA-dependent RNA polymerase 1 
 mtr-u.5   25482564   RNA-dependent RNA polymerase 1 
 mtr-u.5   25482562   RNA-dependent RNA polymerase 1 
 gma-u.5   100811587   RNA-dependent RNA polymerase 1 
 ppo-u.5   7457809   RNA-dependent RNA polymerase 1 
 ppo-u.5   7459099   probable RNA-dependent RNA polymerase 1 
 ppo-u.5   7471427   probable RNA-dependent RNA polymerase 1 
 ath-u.5   RDR1   RNA-dependent RNA polymerase 1 
 vvi-u.5   100262811   probable RNA-dependent RNA polymerase 1 
 vvi-u.5   100268011   probable RNA-dependent RNA polymerase 1 
 sly-u.5   RdRP   RNA-directed RNA polymerase 
 osa-u.5   4330655   probable RNA-dependent RNA polymerase 1 
 zma-u.5   100502529   uncharacterized LOC100502529 

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Top 50 coexpressed genes to 25482568 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25482568 (mtr-u.5 coexpression data)

CoexMap"25482568"


mtrLOC25482568 | Entrez gene ID : 25482568      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (21 genes)  IEA  
GO CC
GO:0031380 [list] [network] nuclear RNA-directed RNA polymerase complex  (8 genes)  IEA  
GO MF
GO:0003968 [list] [network] RNA-directed RNA polymerase activity  (8 genes)  IEA  
Protein XP_039689944.1 [sequence] [blastp]
XP_039689946.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  cysk 1  (predict for XP_039689944.1)
cyto 5,  nucl 2,  chlo 1,  cysk 1  (predict for XP_039689946.1)
Subcellular
localization
TargetP
other 8  (predict for XP_039689944.1)
other 8  (predict for XP_039689946.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482568

.
mtr-r.5
for
25482568

.
mtr-u.5
for
25482564

.
mtr-u.5
for
25482562

.
gma-u.5
for
100811587

.
ppo-u.5
for
7457809

.
ppo-u.5
for
7459099

.
ppo-u.5
for
7471427

.
ath-u.5
for
RDR1

.
vvi-u.5
for
100262811

.
vvi-u.5
for
100268011

.
sly-u.5
for
RdRP

.
osa-u.5
for
4330655

.
zma-u.5
for
100502529

.


Ortholog ID: 5407
Species ath gma sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol RDR1 LOC100811587 RdRP LOC4330655 LOC100502529 LOC103872274 LOC100262811 LOC100268011 LOC7457809 LOC7459099 LOC25482562 LOC25482564 LOC123128326 LOC123128327 LOC123403439 LOC123401198 LOC107913503 LOC107920197 LOC106400784 LOC106346610 LOC8075746 LOC102578970 LOC102578633 LOC102610690 LOC102606638 LOC100844989 LOC107827981 LOC107788900
Function* RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 RNA-directed RNA polymerase probable RNA-dependent RNA polymerase 1 uncharacterized LOC100502529 RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1-like RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 probable RNA-dependent RNA polymerase 1 putative RNA-dependent RNA polymerase 1 putative RNA-dependent RNA polymerase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00670 One carbon pool by folate 2
bra01200 Carbon metabolism 2
bra01240 Biosynthesis of cofactors 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
tae01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta00966 Glucosinolate biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta00966 Glucosinolate biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838044 100811587 544124 4330655 100502529 103872274 100262811 100268011 7457809 7459099 25482562 25482564 123128326 123128327 123403439 123401198 107913503 107920197 106400784 106346610 8075746 102578970 102578633 102610690 102606638 100844989 107827981 107788900
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