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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25486321   twinkle homolog protein, chloroplastic/mitochondrial 
 mtr-r.5   25486321   twinkle homolog protein, chloroplastic/mitochondrial 
 gma-u.5   100804637   twinkle homolog protein, chloroplastic/mitochondrial 
 gma-u.5   100779625   twinkle homolog protein, chloroplastic/mitochondrial 
 ppo-u.5   7480391   twinkle homolog protein, chloroplastic/mitochondrial 
 ath-u.5   AT1G30680   toprim domain-containing protein 
 vvi-u.5   100247126   twinkle homolog protein, chloroplastic/mitochondrial 
 vvi-u.5   100257655   twinkle homolog protein, chloroplastic/mitochondrial 
 sly-u.5   101264268   twinkle homolog protein, chloroplastic/mitochondrial 
 osa-u.5   4341808   twinkle homolog protein, chloroplastic/mitochondrial 
 zma-u.5   103629647   twinkle homolog protein, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 25486321 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25486321 (mtr-u.5 coexpression data)

CoexMap"25486321"


mtrLOC25486321 | Entrez gene ID : 25486321      
Species mtr gma ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006260 [list] [network] DNA replication  (122 genes)  IEA  
GO CC
GO MF
GO:0043139 [list] [network] 5'-3' DNA helicase activity  (5 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (64 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
Protein XP_013463045.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_013463045.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_013463045.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25486321
mtr-r.5
for
25486321
gma-u.5
for
100804637
gma-u.5
for
100779625
ppo-u.5
for
7480391
ath-u.5
for
AT1G30680
vvi-u.5
for
100247126
vvi-u.5
for
100257655
sly-u.5
for
101264268
osa-u.5
for
4341808
zma-u.5
for
103629647


Ortholog ID: 9819
Species mtr gma gma ppo ath bra vvi vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC25486321 LOC100804637 LOC100779625 LOC7480391 AT1G30680 LOC103840315 LOC100247126 LOC100257655 LOC107906337 LOC107958509 LOC106367250 LOC106406957 LOC102625113 LOC101264268 LOC102601660 LOC107826455 LOC107819042 LOC4341808 LOC103629647 LOC123157297 LOC123149113 LOC123413648 LOC8061599 LOC100846256 CHLRE_12g514950v5
Function* twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial toprim domain-containing protein twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial-like twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial-like twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial-like twinkle homolog protein, chloroplastic/mitochondrial twinkle homolog protein, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
ghi00220 Arginine biosynthesis 2
ghi00330 Arginine and proline metabolism 2
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00330 Arginine and proline metabolism 2
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna03018 RNA degradation 3
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna03013 Nucleocytoplasmic transport 4
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03020 RNA polymerase 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03020 RNA polymerase 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25486321 100804637 100779625 7480391 839948 103840315 100247126 100257655 107906337 107958509 106367250 106406957 102625113 101264268 102601660 107826455 107819042 4341808 103629647 123157297 123149113 123413648 8061599 100846256 5728554
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