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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25491103   DEAD-box ATP-dependent RNA helicase 20 
 mtr-r.5   25491103   DEAD-box ATP-dependent RNA helicase 20 
 gma-u.5   100818387   DEAD-like helicases superfamily protein 
 gma-u.5   100787545   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7464738   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7494659   ATP-dependent RNA helicase DBP2 
 vvi-u.5   100258635   DEAD-box ATP-dependent RNA helicase 20 
 cit-r.1   102622298   ATP-dependent RNA helicase DBP2-like 
 sly-u.5   101258585   DEAD-box ATP-dependent RNA helicase 20 
 sot-r.1   102596167   DEAD-box ATP-dependent RNA helicase 20-like 
 nta-r.1   107770906   DEAD-box ATP-dependent RNA helicase 20 
 nta-r.1   107800451   DEAD-box ATP-dependent RNA helicase 20 
 cre-r.1   CHLRE_03g158750v5   uncharacterized protein 

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Top 50 coexpressed genes to 25491103 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25491103 (mtr-u.5 coexpression data)

CoexMap"25491103"


mtrLOC25491103 | Entrez gene ID : 25491103      
Species mtr gma ppo vvi cit sly sot nta cre bdi osa tae bna zma sbi ath bra ghi hvu
Paralog 2 2 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03040 [list] [network] Spliceosome (435 genes)
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (72 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4267 genes)  IEA  
Protein XP_013460474.1 [sequence] [blastp]
XP_024635995.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  vacu 1,  nucl 1,  pero 1,  E.R._vacu 1  (predict for XP_013460474.1)
chlo 6,  pero 2,  vacu 1  (predict for XP_024635995.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013460474.1)
chlo 8  (predict for XP_024635995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25491103
mtr-r.5
for
25491103
gma-u.5
for
100818387
gma-u.5
for
100787545
ppo-u.5
for
7464738
ppo-u.5
for
7494659
vvi-u.5
for
100258635
cit-r.1
for
102622298
sly-u.5
for
101258585
sot-r.1
for
102596167
nta-r.1
for
107770906
nta-r.1
for
107800451
cre-r.1
for
CHLRE_03g158750v5


Ortholog ID: 14561
Species mtr gma gma ppo ppo vvi cit sly sot nta nta cre
Symbol LOC25491103 LOC100818387 LOC100787545 LOC7464738 LOC7494659 LOC100258635 LOC102622298 LOC101258585 LOC102596167 LOC107770906 LOC107800451 CHLRE_03g158750v5
Function* DEAD-box ATP-dependent RNA helicase 20 DEAD-like helicases superfamily protein DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 ATP-dependent RNA helicase DBP2 DEAD-box ATP-dependent RNA helicase 20 ATP-dependent RNA helicase DBP2-like DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20-like DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 6
mtr00860 Porphyrin metabolism 5
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00906 Carotenoid biosynthesis 2
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25491103 100818387 100787545 7464738 7494659 100258635 102622298 101258585 102596167 107770906 107800451 5723019
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