ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25491230	uncharacterized LOC25491230
mtr-r.5	25491230	uncharacterized LOC25491230
gma-u.5	100785526	uncharacterized LOC100785526
gma-u.5	100775527	uncharacterized LOC100775527
ppo-u.5	7469469	uncharacterized LOC7469469
ppo-u.5	7490851	uncharacterized LOC7490851
ath-u.5	AT3G21140	Pyridoxamine 5'-phosphate oxidase family protein
ath-u.5	AT1G51560	Pyridoxamine 5'-phosphate oxidase family protein
bra-r.6	103868562	uncharacterized LOC103868562
bra-r.6	103859889	uncharacterized LOC103859889
bra-r.6	103869206	uncharacterized LOC103869206
vvi-u.5	100253108	uncharacterized LOC100253108
ghi-r.1	107951044	uncharacterized LOC107951044
ghi-r.1	107910611	uncharacterized LOC107910611
ghi-r.1	107906352	uncharacterized LOC107906352
bna-r.1	106451649	uncharacterized LOC106451649
bna-r.1	125603091	uncharacterized LOC125603091
bna-r.1	106451646	uncharacterized LOC106451646
cit-r.1	102617224	uncharacterized LOC102617224
sly-u.5	101268193	uncharacterized LOC101268193
sot-r.1	102581125	uncharacterized LOC102581125
nta-r.1	107810895	uncharacterized LOC107810895
nta-r.1	107760047	uncharacterized LOC107760047
nta-r.1	107783008	non-canonical heme oxygenase HOZ, chloroplastic
osa-u.5	4328299	uncharacterized LOC4328299
osa-u.5	4346040	uncharacterized LOC4346040
zma-u.5	100193760	Pyridoxamine 5'-phosphate oxidase family protein
zma-u.5	100282804	uncharacterized LOC100282804
tae-r.2	123151506	uncharacterized LOC123151506
tae-r.2	123156312	uncharacterized LOC123156312
tae-r.2	123166124	uncharacterized LOC123166124
hvu-r.1	123413565	uncharacterized LOC123413565
sbi-r.1	8074630	uncharacterized LOC8074630
sbi-r.1	110436968	uncharacterized LOC110436968
bdi-r.1	100823180	uncharacterized LOC100823180
cre-r.1	CHLRE_12g520200v5	uncharacterized protein

Top 50 coexpressed genes to 25491230 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25491230 (mtr-u.5 coexpression data)

CoexMap"25491230"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013454567.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 4, mito 1

(predict for XP_013454567.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013454567.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25491230	mtr-r.5 for 25491230	gma-u.5 for 100785526	gma-u.5 for 100775527	ppo-u.5 for 7469469	ppo-u.5 for 7490851	ath-u.5 for AT3G21140	ath-u.5 for AT1G51560	bra-r.6 for 103868562	bra-r.6 for 103859889	bra-r.6 for 103869206	vvi-u.5 for 100253108	ghi-r.1 for 107951044	ghi-r.1 for 107910611	ghi-r.1 for 107906352	bna-r.1 for 106451649	bna-r.1 for 125603091	bna-r.1 for 106451646	cit-r.1 for 102617224	sly-u.5 for 101268193	sot-r.1 for 102581125	nta-r.1 for 107810895	nta-r.1 for 107760047	nta-r.1 for 107783008	osa-u.5 for 4328299	osa-u.5 for 4346040	zma-u.5 for 100193760	zma-u.5 for 100282804	tae-r.2 for 123151506	tae-r.2 for 123156312	tae-r.2 for 123166124	hvu-r.1 for 123413565	sbi-r.1 for 8074630	sbi-r.1 for 110436968	bdi-r.1 for 100823180	cre-r.1 for CHLRE_12g520200v5

Ortholog

Ortholog ID: 4083

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC25491230

uncharacterized LOC100785526

uncharacterized LOC100775527

uncharacterized LOC7469469

uncharacterized LOC7490851

Pyridoxamine 5'-phosphate oxidase family protein

uncharacterized LOC103868562

uncharacterized LOC103869206

uncharacterized LOC103835405

uncharacterized LOC100253108

uncharacterized LOC107951044

uncharacterized LOC107906352

uncharacterized LOC121229318

uncharacterized LOC125603091

uncharacterized BNAA01G25330D

uncharacterized LOC106421835

uncharacterized LOC102617224

uncharacterized LOC101268193

uncharacterized LOC102581125

uncharacterized LOC107810895

non-canonical heme oxygenase HOZ, chloroplastic

uncharacterized LOC107819541

uncharacterized LOC4328299

uncharacterized LOC4346040

Pyridoxamine 5'-phosphate oxidase family protein

uncharacterized LOC100282804

uncharacterized LOC123151506

uncharacterized LOC123156312

uncharacterized LOC123166124

uncharacterized LOC123413565

uncharacterized LOC8074630

uncharacterized LOC110436968

uncharacterized LOC100823180

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	6
mtr01210	2-Oxocarboxylic acid metabolism	3
mtr00640	Propanoate metabolism	2
mtr00785	Lipoic acid metabolism	2
mtr00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	3
gma04146	Peroxisome	3
gma00380	Tryptophan metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00380	Tryptophan metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma01200	Carbon metabolism	2
gma04016	MAPK signaling pathway - plant	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra00010	Glycolysis / Gluconeogenesis	3
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra00260	Glycine, serine and threonine metabolism	2
bra00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4
sly00230	Purine metabolism	3
sly00970	Aminoacyl-tRNA biosynthesis	3
sly01240	Biosynthesis of cofactors	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00620	Pyruvate metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	3
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00230	Purine metabolism	5
zma01240	Biosynthesis of cofactors	4
zma00340	Histidine metabolism	2
zma01230	Biosynthesis of amino acids	2
zma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma00250	Alanine, aspartate and glutamate metabolism	2
zma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00230	Purine metabolism	2
hvu01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	3
cre00260	Glycine, serine and threonine metabolism	2
cre01200	Carbon metabolism	2
cre01230	Biosynthesis of amino acids	2
cre00240	Pyrimidine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

25491230

100785526

100775527

7469469

7490851

821666

841581

103868562

103869206

103835405

100253108

107951044

107906352

121229318

125603091

106345784

106421835

102617224

101268193

102581125

107810895

107783008

107819541

4328299

4346040

100193760

100282804

123151506

123156312

123166124

123413565

8074630

110436968

100823180

5722597

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	2	2	3	1	3	3	1	1	1	3	2	2	3	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25491230 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25491230 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**