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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25493035   myb family transcription factor EFM 
 mtr-r.5   25493035   myb family transcription factor EFM 
 mtr-u.5   11416542   transcription factor HHO5 
 gma-u.5   100817326   transcription factor HHO5 
 gma-u.5   100812420   transcription factor HHO2 
 gma-u.5   100809323   myb family transcription factor EFM 
 ppo-u.5   7483133   transcription factor HHO5 
 ppo-u.5   18097827   transcription factor HHO6 
 ppo-u.5   7490005   myb family transcription factor EFM 
 ath-u.5   AT4G37180   Homeodomain-like superfamily protein 
 ath-u.5   AT1G49560   Homeodomain-like superfamily protein 
 vvi-u.5   100243049   transcription factor HHO5 
 vvi-u.5   100267475   transcription factor HHO6 
 sly-u.5   101255362   transcription factor HHO5-like 
 sly-u.5   101243935   Myb family transcription factor 
 osa-u.5   4342269   myb family transcription factor EFM 
 osa-u.5   4334216   transcription factor HHO5 
 osa-u.5   4352661   transcription factor HHO6 
 zma-u.5   103640508   transcription factor HHO6 
 zma-u.5   100283628   uncharacterized LOC100283628 
 zma-u.5   100282724   uncharacterized LOC100282724 

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Top 50 coexpressed genes to 25493035 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25493035 (mtr-u.5 coexpression data)

CoexMap"25493035"


mtrLOC25493035 | Entrez gene ID : 25493035      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 3 3 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1100 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013456886.1 [sequence] [blastp]
XP_013456887.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_013456886.1)
nucl 8,  cyto 1  (predict for XP_013456887.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013456886.1)
other 6  (predict for XP_013456887.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25493035

.
mtr-r.5
for
25493035

.
mtr-u.5
for
11416542

.
gma-u.5
for
100817326

.
gma-u.5
for
100812420

.
gma-u.5
for
100809323

.
ppo-u.5
for
7483133

.
ppo-u.5
for
18097827

.
ppo-u.5
for
7490005

.
ath-u.5
for
AT4G37180

.
ath-u.5
for
AT1G49560

.
vvi-u.5
for
100243049

.
vvi-u.5
for
100267475

.
sly-u.5
for
101255362

.
sly-u.5
for
101243935

.
osa-u.5
for
4342269

.
osa-u.5
for
4334216

.
osa-u.5
for
4352661

.
zma-u.5
for
103640508

.
zma-u.5
for
100283628

.
zma-u.5
for
100282724

.


Ortholog ID: 1435
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G49560 AT4G37180 LOC100803341 LOC100785723 LOC101243935 LOC101255362 LOC4334216 LOC4352661 LOC100282724 LOC100280246 LOC103868788 LOC103835011 LOC100243049 LOC100267475 LOC18099359 LOC18097827 LOC25493035 LOC11416542 LOC123052916 LOC123188881 LOC123426316 LOC107953410 LOC107933192 LOC125583891 LOC106436674 LOC110432018 LOC8069712 LOC102600464 LOC102591830 LOC102611292 LOC102610013 LOC100829239 LOC100822080 LOC107769216 LOC107769242
Function* Homeodomain-like superfamily protein Homeodomain-like superfamily protein myb family transcription factor EFM transcription factor HHO5 Myb family transcription factor transcription factor HHO5-like transcription factor HHO5 transcription factor HHO6 uncharacterized LOC100282724 uncharacterized LOC100280246 transcription factor HHO6 transcription factor HHO5 transcription factor HHO5 transcription factor HHO6 transcription factor HHO5 transcription factor HHO6 myb family transcription factor EFM transcription factor HHO5 myb family transcription factor EFM transcription factor NIGTH1 transcription factor NIGTH1-like transcription factor HHO6 transcription factor HHO5 transcription factor HHO5-like transcription factor HHO5 transcription factor HHO5-like transcription factor HHO2 uncharacterized LOC102600464 uncharacterized LOC102591830 transcription factor HHO2-like transcription factor HHO5 transcription factor HHO5 transcription factor HHO6 transcription factor HHO6-like transcription factor HHO6-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 5
gma00250 Alanine, aspartate and glutamate metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
osa00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04082 Neuroactive ligand signaling 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04626 Plant-pathogen interaction 2
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841380 829872 100803341 100785723 101243935 101255362 4334216 4352661 100282724 100280246 103868788 103835011 100243049 100267475 18099359 18097827 25493035 11416542 123052916 123188881 123426316 107953410 107933192 125583891 106436674 110432018 8069712 102600464 102591830 102611292 102610013 100829239 100822080 107769216 107769242
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