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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25495524   proline dehydrogenase 1, mitochondrial 
 mtr-u.5   11439289   proline dehydrogenase 2, mitochondrial 
 mtr-u.5   25495522   proline dehydrogenase 2, mitochondrial 
 gma-u.5   PDH   proline dehydrogenase 
 gma-u.5   100799876   proline dehydrogenase 2, mitochondrial 
 gma-u.5   100798942   proline dehydrogenase 2, mitochondrial 
 ppo-u.5   18107429   proline dehydrogenase 2, mitochondrial 
 ppo-u.5   7468373   proline dehydrogenase 2, mitochondrial 
 ath-u.5   ERD5   Methylenetetrahydrofolate reductase family protein 
 ath-u.5   AT5G38710   Methylenetetrahydrofolate reductase family protein 
 vvi-u.5   100254983   proline dehydrogenase 2, mitochondrial 
 sly-u.5   PDH   proline dehydrogenase 
 sly-u.5   101268445   proline dehydrogenase 2, mitochondrial 
 osa-u.5   4349318   proline dehydrogenase 2, mitochondrial 
 zma-u.5   100281269   proline oxidase 

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Top 50 coexpressed genes to 25495524 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25495524 (mtr-u.5 coexpression data)

CoexMap"25495523"


mtrLOC25495523 | Entrez gene ID : 25495523    
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 2 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00330 [list] [network] Arginine and proline metabolism (75 genes)
GO BP
GO:0010133 [list] [network] L-proline catabolic process to L-glutamate  (5 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (694 genes)  IEA  
GO MF
GO:0004657 [list] [network] proline dehydrogenase activity  (4 genes)  IEA  
GO:0071949 [list] [network] FAD binding  (85 genes)  IEA  
Protein XP_013451200.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  chlo 2,  golg 1  (predict for XP_013451200.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_013451200.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25495524
mtr-u.5
for
11439289
mtr-u.5
for
25495522
gma-u.5
for
PDH
gma-u.5
for
100799876
gma-u.5
for
100798942
ppo-u.5
for
18107429
ppo-u.5
for
7468373
ath-u.5
for
ERD5
ath-u.5
for
AT5G38710
vvi-u.5
for
100254983
sly-u.5
for
PDH
sly-u.5
for
101268445
osa-u.5
for
4349318
zma-u.5
for
100281269


Ortholog ID: 3466
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi ghi ghi bna bna cit sly sly sot sot nta nta osa zma tae tae hvu sbi bdi cre cre
Symbol LOC11439289 LOC25495522 LOC100797464 LOC100799876 LOC18107429 LOC7468373 ERD5 AT5G38710 LOC103837228 LOC103854501 LOC100254983 LOC107954821 LOC107962246 LOC125589774 LOC106397782 LOC102606965 PDH LOC101268445 LOC102588726 LOC102588395 LOC107777338 LOC107783527 LOC4349318 LOC100281269 LOC123181604 LOC123127675 LOC123438304 LOC8058116 LOC100838313 CHLRE_01g036850v5 CHLRE_16g648350v5
Function* proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial Methylenetetrahydrofolate reductase family protein Methylenetetrahydrofolate reductase family protein proline dehydrogenase 1, mitochondrial proline dehydrogenase 1, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 1, mitochondrial-like proline dehydrogenase 1, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial-like proline dehydrogenase 2, mitochondrial-like proline dehydrogenase 2, mitochondrial-like proline dehydrogenase 2, mitochondrial-like proline dehydrogenase 2, mitochondrial proline oxidase proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial-like proline dehydrogenase 2, mitochondrial proline dehydrogenase 2, mitochondrial uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 6
mtr04075 Plant hormone signal transduction 5
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00280 Valine, leucine and isoleucine degradation 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00943 Isoflavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00052 Galactose metabolism 2
ath00330 Arginine and proline metabolism 2
ath00053 Ascorbate and aldarate metabolism 2
ath00562 Inositol phosphate metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath00940 Phenylpropanoid biosynthesis 2
ath00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra00330 Arginine and proline metabolism 2
bra00270 Cysteine and methionine metabolism 2
bra00280 Valine, leucine and isoleucine degradation 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 2
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00330 Arginine and proline metabolism 3
sot00053 Ascorbate and aldarate metabolism 2
sot00562 Inositol phosphate metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00620 Pyruvate metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 8
nta04075 Plant hormone signal transduction 8
nta00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00052 Galactose metabolism 2
zma00053 Ascorbate and aldarate metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu00040 Pentose and glucuronate interconversions 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
sbi01240 Biosynthesis of cofactors 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00020 Citrate cycle (TCA cycle) 3
cre00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 3
cre00250 Alanine, aspartate and glutamate metabolism 3
cre00500 Starch and sucrose metabolism 2
cre00220 Arginine biosynthesis 2
cre00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11439289 25495522 100797464 100799876 18107429 7468373 822833 833862 103837228 103854501 100254983 107954821 107962246 125589774 106397782 102606965 778202 101268445 102588726 102588395 107777338 107783527 4349318 100281269 123181604 123127675 123438304 8058116 100838313 5715485 5723749
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