Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25496479   sister chromatid cohesion protein SCC4 
 mtr-r.5   25496479   sister chromatid cohesion protein SCC4 
 mtr-u.5   11430059   sister chromatid cohesion protein SCC4 
 gma-u.5   100780498   sister chromatid cohesion protein SCC4 
 gma-u.5   100777199   sister chromatid cohesion protein SCC4 
 ppo-u.5   7494645   sister chromatid cohesion protein SCC4 
 ath-u.5   AT5G51340   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100253529   sister chromatid cohesion protein SCC4 
 sly-u.5   101249677   sister chromatid cohesion protein SCC4 
 osa-u.5   4335536   sister chromatid cohesion protein SCC4 
 zma-u.5   100192084   uncharacterized LOC100192084 

close


Top 50 coexpressed genes to 25496479 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 25496479 (mtr-u.5 coexpression data)

CoexMap"25496479"


mtrLOC25496479 | Entrez gene ID : 25496479      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (16 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_039682910.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  extr 1,  chlo_mito 1  (predict for XP_039682910.1)
Subcellular
localization
TargetP
other 8  (predict for XP_039682910.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25496479
mtr-r.5
for
25496479
mtr-u.5
for
11430059
gma-u.5
for
100780498
gma-u.5
for
100777199
ppo-u.5
for
7494645
ath-u.5
for
AT5G51340
vvi-u.5
for
100253529
sly-u.5
for
101249677
osa-u.5
for
4335536
zma-u.5
for
100192084


Ortholog ID: 9731
Species mtr mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC25496479 LOC11430059 LOC100780498 LOC100777199 LOC7494645 AT5G51340 LOC103844391 LOC100253529 LOC107927106 LOC107963815 LOC125593473 LOC106406098 LOC102626523 LOC101249677 LOC102584451 LOC107781999 LOC107768693 LOC4335536 LOC100192084 LOC123053066 LOC123045231 LOC123426456 LOC8069436 LOC100845559 CHLRE_12g532650v5
Function* sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 Tetratricopeptide repeat (TPR)-like superfamily protein sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 uncharacterized LOC102584451 sister chromatid cohesion protein SCC4-like sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 uncharacterized LOC100192084 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 sister chromatid cohesion protein SCC4 uncharacterized LOC8069436 sister chromatid cohesion protein SCC4 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 3
ppo03420 Nucleotide excision repair 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03040 Spliceosome 3
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03450 Non-homologous end-joining 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03083 Polycomb repressive complex 2
zma03040 Spliceosome 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 3
cre03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25496479 11430059 100780498 100777199 7494645 835208 103844391 100253529 107927106 107963815 125593473 106406098 102626523 101249677 102584451 107781999 107768693 4335536 100192084 123053066 123045231 123426456 8069436 100845559 66055654
The preparation time of this page was 0.2 [sec].