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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25497640   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 gma-u.5   100798825   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 gma-u.5   100786212   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 ppo-u.5   18107438   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 ppo-u.5   7468387   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 ath-u.5   AT3G02490   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G15980   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103858962   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 bra-r.6   103846369   pentatricopeptide repeat-containing protein At5g15980, mitochondrial 
 vvi-u.5   100242865   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 ghi-r.1   121223551   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 bna-r.1   106372191   pentatricopeptide repeat-containing protein At5g15980, mitochondrial 
 bna-r.1   106424755   pentatricopeptide repeat-containing protein At5g15980, mitochondrial 
 bna-r.1   106438936   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 cit-r.1   102609581   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 sly-u.5   101244824   pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like 
 sot-r.1   102591489   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 nta-r.1   107765721   pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like 
 nta-r.1   107807208   pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like 
 tae-r.2   123136672   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 tae-r.2   123129551   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 hvu-r.1   123401557   pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like 
 sbi-r.1   8082913   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 
 bdi-r.1   104583456   pentatricopeptide repeat-containing protein At3g02490, mitochondrial 

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Top 50 coexpressed genes to 25497640 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25497640 (mtr-u.5 coexpression data)

CoexMap"25497641"


mtrLOC25497641 | Entrez gene ID : 25497641    
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta tae hvu sbi bdi osa cre zma
Paralog 1 2 2 2 2 1 1 3 1 1 1 2 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008380 [list] [network] RNA splicing  (188 genes)  IEA  
GO CC
GO MF
Protein XP_024626523.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_024626523.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_024626523.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25497640
gma-u.5
for
100798825
gma-u.5
for
100786212
ppo-u.5
for
18107438
ppo-u.5
for
7468387
ath-u.5
for
AT3G02490
ath-u.5
for
AT5G15980
bra-r.6
for
103858962
bra-r.6
for
103846369
vvi-u.5
for
100242865
ghi-r.1
for
121223551
bna-r.1
for
106372191
bna-r.1
for
106424755
bna-r.1
for
106438936
cit-r.1
for
102609581
sly-u.5
for
101244824
sot-r.1
for
102591489
nta-r.1
for
107765721
nta-r.1
for
107807208
tae-r.2
for
123136672
tae-r.2
for
123129551
hvu-r.1
for
123401557
sbi-r.1
for
8082913
bdi-r.1
for
104583456


Ortholog ID: 10080
Species mtr gma gma ppo ppo ath ath bra bra vvi ghi bna bna bna cit sly sot nta nta tae tae hvu sbi bdi
Symbol LOC25497640 LOC100798825 LOC100786212 LOC18107438 LOC7468387 AT3G02490 AT5G15980 LOC103858962 LOC103846369 LOC100242865 LOC121223551 LOC106372191 LOC106424755 LOC106438936 LOC102609581 LOC101244824 LOC102591489 LOC107765721 LOC107807208 LOC123136672 LOC123129551 LOC123401557 LOC8082913 LOC104583456
Function* pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At5g15980, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At5g15980, mitochondrial pentatricopeptide repeat-containing protein At5g15980, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like pentatricopeptide repeat-containing protein At3g02490, mitochondrial pentatricopeptide repeat-containing protein At3g02490, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25497640 100798825 100786212 18107438 7468387 820563 831455 103858962 103846369 100242865 121223551 106372191 106424755 106438936 102609581 101244824 102591489 107765721 107807208 123136672 123129551 123401557 8082913 104583456
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