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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25499000   protein ROOT PRIMORDIUM DEFECTIVE 1 
 mtr-r.5   25499000   protein ROOT PRIMORDIUM DEFECTIVE 1 
 gma-u.5   100789857   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5   100243149   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5   101248441   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   9267918   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-u.5   103640669   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 zma-u.5   100502365   uncharacterized LOC100502365 

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Top 50 coexpressed genes to 25499000 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25499000 (mtr-u.5 coexpression data)

CoexMap"25499000"


mtrLOC25499000 | Entrez gene ID : 25499000      
Species mtr gma ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024625165.1 [sequence] [blastp]
XP_024625168.1 [sequence] [blastp]
XP_039684020.1 [sequence] [blastp]
XP_039684021.1 [sequence] [blastp]
XP_039684022.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_024625165.1)
chlo 9  (predict for XP_024625168.1)
chlo 9  (predict for XP_039684020.1)
chlo 9  (predict for XP_039684021.1)
chlo 9  (predict for XP_039684022.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_024625165.1)
mito 6  (predict for XP_024625168.1)
mito 6  (predict for XP_039684020.1)
mito 6  (predict for XP_039684021.1)
mito 6  (predict for XP_039684022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25499000
mtr-r.5
for
25499000
gma-u.5
for
100789857
ath-u.5
for
AT5G45790
vvi-u.5
for
100243149
sly-u.5
for
101248441
osa-u.5
for
9267918
zma-u.5
for
103640669
zma-u.5
for
100502365


Ortholog ID: 10980
Species mtr gma ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma hvu sbi bdi
Symbol LOC25499000 LOC100789857 AT5G45790 LOC103827772 LOC100243149 LOC121228873 LOC107922417 LOC111208735 LOC111198773 LOC102617783 LOC101248441 LOC102602355 LOC107777977 LOC107799291 LOC9267918 LOC103640669 LOC100502365 LOC123448190 LOC8071429 LOC100836990
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like uncharacterized LOC100502365 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25499000 100789857 834619 103827772 100243149 121228873 107922417 111208735 111198773 102617783 101248441 102602355 107777977 107799291 9267918 103640669 100502365 123448190 8071429 100836990
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