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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25500097   lysine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-r.5   25500097   lysine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100787720   lysine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18097228   lysine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   OVA5   Lysyl-tRNA synthetase, class II 
 vvi-u.5   100262063   lysine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101243628   lysine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4330025   lysine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   103645723   lysine--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 25500097 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25500097 (mtr-u.5 coexpression data)

CoexMap"25500097"


mtrLOC25500097 | Entrez gene ID : 25500097      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00970 [list] [network] Aminoacyl-tRNA biosynthesis (107 genes)
GO BP
GO:0006430 [list] [network] lysyl-tRNA aminoacylation  (5 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (694 genes)  IEA  
GO:0005829 [list] [network] cytosol  (784 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4514 genes)  IEA  
GO MF
GO:0004824 [list] [network] lysine-tRNA ligase activity  (5 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (28 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
Protein XP_013443877.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013443877.1)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for XP_013443877.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25500097
mtr-r.5
for
25500097
gma-u.5
for
100787720
ppo-u.5
for
18097228
ath-u.5
for
OVA5
vvi-u.5
for
100262063
sly-u.5
for
101243628
osa-u.5
for
4330025
zma-u.5
for
103645723


Ortholog ID: 10764
Species mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC25500097 LOC100787720 LOC18097228 OVA5 LOC103870126 LOC100262063 LOC107926317 LOC121220173 LOC106452279 LOC106440598 LOC102623380 LOC101243628 LOC102590674 LOC107829706 LOC107829241 LOC4330025 LOC103645723 LOC123144861 LOC123127738 LOC123401556 LOC8080192 LOC100837408 CHLRE_06g296250v5
Function* lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial Lysyl-tRNA synthetase, class II lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial-like lysine--tRNA ligase, chloroplastic/mitochondrial-like lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial lysine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00290 Valine, leucine and isoleucine biosynthesis 3
gma00660 C5-Branched dibasic acid metabolism 3
gma01210 2-Oxocarboxylic acid metabolism 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra01210 2-Oxocarboxylic acid metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03060 Protein export 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03060 Protein export 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
bna03018 RNA degradation 5
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03010 Ribosome 2
cit01240 Biosynthesis of cofactors 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
sly01240 Biosynthesis of cofactors 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae01240 Biosynthesis of cofactors 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00770 Pantothenate and CoA biosynthesis 2
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25500097 100787720 18097228 820551 103870126 100262063 107926317 121220173 106452279 106440598 102623380 101243628 102590674 107829706 107829241 4330025 103645723 123144861 123127738 123401556 8080192 100837408 5717055
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