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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25500734   jasmonoyl--L-amino acid synthetase JAR6 
 mtr-r.5   25500734   jasmonoyl--L-amino acid synthetase JAR6 
 mtr-u.5   11431770   jasmonoyl--L-amino acid synthetase JAR4 
 mtr-u.5   25500738   jasmonoyl--L-amino acid synthetase JAR6 
 mtr-u.5   25500739   jasmonoyl--L-amino acid synthetase JAR4 
 gma-u.5   100813492   jasmonoyl--L-amino acid synthetase JAR4 
 gma-u.5   100806209   jasmonoyl--L-amino acid synthetase JAR4 
 gma-u.5   100794598   jasmonoyl--L-amino acid synthetase JAR4 
 ppo-u.5   7494139   jasmonoyl--L-amino acid synthetase JAR4 
 ppo-u.5   7497237   jasmonoyl--L-amino acid synthetase JAR6 
 ath-u.5   JAR1   Auxin-responsive GH3 family protein 
 vvi-u.5   100251627   jasmonoyl--L-amino acid synthetase JAR4 
 sly-u.5   GH3-12   jasmonoyl--L-amino acid synthetase JAR6 
 sly-u.5   GH3-13   jasmonoyl--L-amino acid synthetase JAR6 
 sly-u.5   JAR1   jasmonoyl--L-amino acid synthetase JAR6 
 osa-u.5   4324650   jasmonoyl--L-amino acid synthetase GH3.3-like 
 osa-u.5   4339756   jasmonic acid-amido synthetase JAR1-like 
 osa-u.5   107275638   probable indole-3-acetic acid-amido synthetase GH3.12 
 zma-u.5   103649563   probable indole-3-acetic acid-amido synthetase GH3.12 
 zma-u.5   100193303   uncharacterized LOC100193303 
 zma-u.5   100280367   uncharacterized LOC100280367 

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Top 50 coexpressed genes to 25500734 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25500734 (mtr-u.5 coexpression data)

CoexMap"25500734"


mtrLOC25500734 | Entrez gene ID : 25500734      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 1 1 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr04075 [list] [network] Plant hormone signal transduction (454 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4514 genes)  IEA  
GO MF
GO:0016881 [list] [network] acid-amino acid ligase activity  (26 genes)  IEA  
Protein XP_013444673.2 [sequence] [blastp]
XP_024629502.2 [sequence] [blastp]
XP_024629503.2 [sequence] [blastp]
XP_039685614.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_013444673.2)
cyto 4,  chlo 3,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024629502.2)
cyto 4,  chlo 3,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024629503.2)
cyto 6,  chlo 2,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_039685614.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013444673.2)
other 8  (predict for XP_024629502.2)
other 8  (predict for XP_024629503.2)
other 8  (predict for XP_039685614.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25500734
mtr-r.5
for
25500734
mtr-u.5
for
11431770
mtr-u.5
for
25500738
mtr-u.5
for
25500739
gma-u.5
for
100813492
gma-u.5
for
100806209
gma-u.5
for
100794598
ppo-u.5
for
7494139
ppo-u.5
for
7497237
ath-u.5
for
JAR1
vvi-u.5
for
100251627
sly-u.5
for
GH3-12
sly-u.5
for
GH3-13
sly-u.5
for
JAR1
osa-u.5
for
4324650
osa-u.5
for
4339756
osa-u.5
for
107275638
zma-u.5
for
103649563
zma-u.5
for
100193303
zma-u.5
for
100280367


Ortholog ID: 1796
Species mtr mtr gma gma ppo ppo ath bra bra vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC25500734 LOC25500738 LOC100806209 LOC100813492 LOC7497237 LOC7494139 JAR1 LOC103858212 LOC103866475 LOC100251627 LOC107900937 LOC107952940 LOC106415372 LOC106446159 LOC127898602 LOC102611440 GH3-13 GH3-12 LOC102578750 LOC102603612 LOC142181895 LOC107798060 LOC4324650 LOC4339756 LOC100193303 LOC103649563 LOC123148866 LOC123069272 LOC123452116 LOC123443188 LOC8065295 LOC8084842 LOC100821807 LOC100844662
Function* jasmonoyl--L-amino acid synthetase JAR6 jasmonoyl--L-amino acid synthetase JAR6 jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR6 jasmonoyl--L-amino acid synthetase JAR4 Auxin-responsive GH3 family protein jasmonoyl--L-amino acid synthetase JAR1 jasmonoyl--L-amino acid synthetase JAR1 jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR1 jasmonoyl--L-amino acid synthetase JAR1 jasmonoyl--L-amino acid synthetase JAR4-like jasmonoyl--L-amino acid synthetase JAR4 jasmonoyl--L-amino acid synthetase JAR6 jasmonoyl--L-amino acid synthetase JAR6 probable indole-3-acetic acid-amido synthetase GH3.5 probable indole-3-acetic acid-amido synthetase GH3.5 jasmonoyl--L-amino acid synthetase JAR6-like jasmonoyl--L-amino acid synthetase JAR6-like jasmonoyl--L-amino acid synthetase GH3.3-like jasmonic acid-amido synthetase JAR1-like uncharacterized LOC100193303 probable indole-3-acetic acid-amido synthetase GH3.12 jasmonoyl--L-amino acid synthetase GH3.5 jasmonoyl--L-amino acid synthetase GH3.3 jasmonoyl--L-amino acid synthetase GH3.5 jasmonoyl--L-amino acid synthetase GH3.3-like jasmonic acid-amido synthetase JAR1 jasmonic acid-amido synthetase JAR1 jasmonic acid-amido synthetase JAR1 jasmonic acid-amido synthetase JAR2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
ppo04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 12
ppo04016 MAPK signaling pathway - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 3
ath00966 Glucosinolate biosynthesis 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00053 Ascorbate and aldarate metabolism 2
bra00071 Fatty acid degradation 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 10
ghi00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
cit04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
cit04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
tae04075 Plant hormone signal transduction 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00051 Fructose and mannose metabolism 3
sbi01240 Biosynthesis of cofactors 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25500734 25500738 100806209 100813492 7497237 7494139 819244 103858212 103866475 100251627 107900937 107952940 106415372 106446159 127898602 102611440 101262357 101262663 102578750 102603612 142181895 107798060 4324650 4339756 100193303 103649563 123148866 123069272 123452116 123443188 8065295 8084842 100821807 100844662
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