ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT2G41945	uncharacterized protein
ath-r.7	AT2G41945	uncharacterized protein
ath-e.2	AT2G41945	uncharacterized protein
bra-r.6	103858003	uncharacterized LOC103858003
bna-r.1	106428176	uncharacterized LOC106428176
bna-r.1	106388268	uncharacterized LOC106388268
ghi-r.1	107913873	uncharacterized LOC107913873
ghi-r.1	121203633	uncharacterized LOC121203633
ghi-r.1	107913867	uncharacterized LOC107913867
cit-r.1	102617162	uncharacterized LOC102617162
gma-u.5	100305518	uncharacterized LOC100305518
gma-u.5	100819935	uncharacterized LOC100819935
vvi-u.5	100252017	uncharacterized LOC100252017
ppo-u.5	7479512	uncharacterized LOC7479512
mtr-u.5	25483559	uncharacterized LOC25483559
sly-u.5	101246958	uncharacterized LOC101246958
sly-u.5	101256223	uncharacterized LOC101256223
sot-r.1	102583855	uncharacterized LOC102583855
sot-r.1	102597697	uncharacterized LOC102597697
nta-r.1	107776235	uncharacterized LOC107776235
nta-r.1	107761325	uncharacterized LOC107761325
osa-u.5	112936022	uncharacterized LOC112936022
zma-u.5	100281979	gb protein
tae-r.2	123158918	uncharacterized LOC123158918
tae-r.2	123152156	uncharacterized LOC123152156
tae-r.2	123165234	uncharacterized LOC123165234
hvu-r.1	123410332	uncharacterized LOC123410332
sbi-r.1	8077327	uncharacterized LOC8077327
bdi-r.1	104581616	uncharacterized LOC104581616

Annotation

functional annotation

KEGG

GO BP

GO:0010431 [list] [network] seed maturation	(68 genes)	IMP
GO:0009793 [list] [network] embryo development ending in seed dormancy	(569 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

Protein

NP_001078039.1 [sequence] [blastp]
NP_001154569.1 [sequence] [blastp]
NP_973663.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 4, mito 1, plas 1, chlo 1, cyto 1, E.R. 1, golg 1, cyto_mito 1, cyto_E.R. 1	(predict for NP_001078039.1)
nucl 4, nucl_plas 4, cyto 2, mito 1, plas 1, cyto_pero 1	(predict for NP_001154569.1)
nucl 3, cyto 1, E.R. 1, cyto_E.R. 1, chlo 1, mito 1, plas 1, vacu 1, cysk 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cysk_plas 1, mito_plas 1	(predict for NP_973663.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001078039.1)
other 7	(predict for NP_001154569.1)
other 7	(predict for NP_973663.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G41945	ath-r.7 for AT2G41945	ath-e.2 for AT2G41945	bra-r.6 for 103858003	bna-r.1 for 106428176	bna-r.1 for 106388268	ghi-r.1 for 107913873	ghi-r.1 for 121203633	ghi-r.1 for 107913867	cit-r.1 for 102617162	gma-u.5 for 100305518	gma-u.5 for 100819935	vvi-u.5 for 100252017	ppo-u.5 for 7479512	mtr-u.5 for 25483559	sly-u.5 for 101246958	sly-u.5 for 101256223	sot-r.1 for 102583855	sot-r.1 for 102597697	nta-r.1 for 107776235	nta-r.1 for 107761325	osa-u.5 for 112936022	zma-u.5 for 100281979	tae-r.2 for 123158918	tae-r.2 for 123152156	tae-r.2 for 123165234	hvu-r.1 for 123410332	sbi-r.1 for 8077327	bdi-r.1 for 104581616

Ortholog

Ortholog ID: 7864

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized protein

uncharacterized LOC103858003

uncharacterized LOC106428176

uncharacterized LOC106388268

uncharacterized LOC107913873

uncharacterized LOC107913867

uncharacterized LOC121216109

uncharacterized LOC102617162

uncharacterized LOC100305518

uncharacterized LOC100819935

uncharacterized LOC100252017

uncharacterized LOC7479512

uncharacterized LOC25483559

uncharacterized LOC101246958

uncharacterized LOC101256223

uncharacterized LOC102583855

uncharacterized LOC102597697

uncharacterized LOC107776235

uncharacterized LOC107761325

uncharacterized LOC112936022

gb protein

uncharacterized LOC123158918

uncharacterized LOC123152156

uncharacterized LOC123165234

uncharacterized LOC123410332

uncharacterized LOC8077327

uncharacterized LOC104581616

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	3
bra00592	alpha-Linolenic acid metabolism	3
bra01040	Biosynthesis of unsaturated fatty acids	3
bra01212	Fatty acid metabolism	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	4
bna00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	4
bna00564	Glycerophospholipid metabolism	4
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03020	RNA polymerase	2
cit03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03022	Basal transcription factors	3
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03018	RNA degradation	3
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03018	RNA degradation	3
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	4
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03020	RNA polymerase	3
zma03420	Nucleotide excision repair	3
zma04120	Ubiquitin mediated proteolysis	3
zma04075	Plant hormone signal transduction	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae00350	Tyrosine metabolism	2
tae00010	Glycolysis / Gluconeogenesis	2
tae00260	Glycine, serine and threonine metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03020	RNA polymerase	2
sbi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

2745591

103858003

106428176

106388268

107913873

107913867

121216109

102617162

100305518

100819935

100252017

7479512

25483559

101246958

101256223

102583855

102597697

107776235

107761325

112936022

100281979

123158918

123152156

123165234

123410332

8077327

104581616

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G41945 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G41945 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	3	1	2	1	1	1	2	2	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G41945 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G41945 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**