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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RTFL16   ROTUNDIFOLIA like 16 
 ath-u.5   RTFL17   ROTUNDIFOLIA like 17 
 ath-u.5   RTFL21   ROTUNDIFOLIA like 21 
 bra-r.6   103871949   uncharacterized LOC103871949 
 bna-r.1   106409052   small polypeptide DEVIL 6-like 
 bna-r.1   106413726   small polypeptide DEVIL 4-like 
 ghi-r.1   107946448   uncharacterized LOC107946448 
 ghi-r.1   107920506   uncharacterized LOC107920506 
 cit-r.1   102621984   small polypeptide DEVIL 6-like 
 cit-r.1   102616705   small polypeptide DEVIL 4 
 ppo-u.5   112328393   small polypeptide DEVIL 4 
 ppo-u.5   112324645   small polypeptide DEVIL 3 
 mtr-u.5   11419615   uncharacterized LOC11419615 
 sly-u.5   104645948   small polypeptide DEVIL 4 
 sly-u.5   101245150   small polypeptide DEVIL 6-like 
 sot-r.1   102583688   uncharacterized LOC102583688 
 sot-r.1   102601800   uncharacterized LOC102601800 
 sot-r.1   102587807   uncharacterized LOC102587807 
 zma-u.5   109943973   uncharacterized LOC109943973 
 hvu-r.1   123408837   small polypeptide DEVIL 4-like 
 hvu-r.1   123408695   small polypeptide DEVIL 4-like 
 sbi-r.1   110433484   uncharacterized LOC110433484 
 bdi-r.1   100834191   uncharacterized LOC100834191 

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Top 50 coexpressed genes to RTFL16 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RTFL16 (ath-u.5 coexpression data)

CoexMap"28721166"


athRTFL18 | Entrez gene ID : 28721166    
Species ath bra bna ghi cit ppo mtr sly sot zma hvu sbi bdi cre vvi nta tae gma osa
Paralog 3 1 2 2 2 2 1 2 3 1 2 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090437 [list] [network] socket cell differentiation  (1 genes)  IMP  
GO:0008285 [list] [network] negative regulation of cell population proliferation  (42 genes)  ISS  
GO:0010218 [list] [network] response to far red light  (57 genes)  IEP  
GO:0010114 [list] [network] response to red light  (73 genes)  IEP  
GO:0048367 [list] [network] shoot system development  (800 genes)  IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA ISS  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001318571.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  golg_plas 1  (predict for NP_001318571.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001318571.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RTFL16
ath-u.5
for
RTFL17
ath-u.5
for
RTFL21
bra-r.6
for
103871949
bna-r.1
for
106409052
bna-r.1
for
106413726
ghi-r.1
for
107946448
ghi-r.1
for
107920506
cit-r.1
for
102621984
cit-r.1
for
102616705
ppo-u.5
for
112328393
ppo-u.5
for
112324645
mtr-u.5
for
11419615
sly-u.5
for
104645948
sly-u.5
for
101245150
sot-r.1
for
102583688
sot-r.1
for
102601800
sot-r.1
for
102587807
zma-u.5
for
109943973
hvu-r.1
for
123408837
hvu-r.1
for
123408695
sbi-r.1
for
110433484
bdi-r.1
for
100834191


Ortholog ID: 622
Species ath ath bra bna ghi cit cit ppo ppo mtr sly sot sot osa osa zma tae hvu sbi bdi
Symbol RTFL16 RTFL21 LOC103875355 LOC106443551 LOC107920506 LOC102621984 LOC102616705 LOC112328393 LOC112324645 LOC11419615 LOC104645948 LOC102583688 LOC102601800 LOC112939280 LOC112939278 LOC100502539 LOC123159042 LOC123408695 LOC110433816 LOC100834191
Function* ROTUNDIFOLIA like 16 ROTUNDIFOLIA like 21 uncharacterized LOC103875355 small polypeptide DEVIL 6 uncharacterized LOC107920506 small polypeptide DEVIL 6-like small polypeptide DEVIL 4 small polypeptide DEVIL 4 small polypeptide DEVIL 3 uncharacterized LOC11419615 small polypeptide DEVIL 4 uncharacterized LOC102583688 uncharacterized LOC102601800 small polypeptide DEVIL 4 small polypeptide DEVIL 4 uncharacterized LOC100502539 small polypeptide DEVIL 4 small polypeptide DEVIL 4-like uncharacterized LOC110433816 uncharacterized LOC100834191
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 4
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa00510 N-Glycan biosynthesis 4
osa00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 4
bdi04517 IgSF CAM signaling 4
bdi04814 Motor proteins 4
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822160 5007837 103875355 106443551 107920506 102621984 102616705 112328393 112324645 11419615 104645948 102583688 102601800 112939280 112939278 100502539 123159042 123408695 110433816 100834191
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