Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   psbF   photosystem II cytochrome b559 beta subunit 
 ath-u.5   psbF   photosystem II protein VI 
 gma-u.5   psbF   photosystem II reaction center subunit VI 
 vvi-u.5   psbF   photosystem II reaction center subunit VI 
 ppo-u.5   psbF   photosystem II protein VI 

close


Top 50 coexpressed genes to psbF (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to psbF (sly-u.5 coexpression data)

CoexMap"4099993"


sotpsbF | Entrez gene ID : 4099993    
Species sly ath gma vvi ppo sbi nta mtr osa cre cit bra hvu bdi sot zma tae bna ghi
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00195 [list] [network] Photosynthesis (86 genes)
GO BP
GO CC
GO MF
Protein YP_635655.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 5,  nucl 2,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for YP_635655.1)
Subcellular
localization
TargetP
scret 8  (predict for YP_635655.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
psbF

.
ath-u.5
for
psbF

.
gma-u.5
for
psbF

.
vvi-u.5
for
psbF

.
ppo-u.5
for
psbF

.


Ortholog ID: 12280
Species ath gma sly vvi ppo cit bdi nta
Symbol psbF psbF psbF psbF psbF psbF psbF psbF
Function* photosystem II protein VI photosystem II reaction center subunit VI photosystem II cytochrome b559 beta subunit photosystem II reaction center subunit VI photosystem II protein VI photosystem II protein VI photosystem II protein VI photosystem II reaction center subunit VI
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 6
sly00190 Oxidative phosphorylation 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo03010 Ribosome 6
ppo00190 Oxidative phosphorylation 4
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00190 Oxidative phosphorylation 6
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 13
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00190 Oxidative phosphorylation 4
nta03010 Ribosome 3
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844746 3989312 3950450 4025053 4929686 4271221 6439878 800446
The preparation time of this page was 0.1 [sec].