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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   psbF   photosystem II protein VI 
 ath-u.5   psbF   photosystem II protein VI 
 gma-u.5   psbF   photosystem II reaction center subunit VI 
 vvi-u.5   psbF   photosystem II reaction center subunit VI 
 ppo-u.5   psbF   photosystem II protein VI 
 sly-u.5   psbF   photosystem II cytochrome b559 beta subunit 
 nta-r.1   psbF   photosystem II reaction center subunit VI 
 bdi-r.1   psbF   photosystem II protein VI 

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Top 50 coexpressed genes to psbF (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psbF (cit-r.1 coexpression data)

CoexMap"4271221"


citpsbF | Entrez gene ID : 4271221    
Species cit ath gma vvi ppo sly nta bdi bra sot zma cre ghi sbi tae mtr osa hvu bna
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00195 [list] [network] Photosynthesis (73 genes)
GO BP
GO CC
GO MF
Protein YP_740491.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 1,  nucl 1,  chlo_mito 1  (predict for YP_740491.1)
Subcellular
localization
TargetP
scret 7,  mito 3  (predict for YP_740491.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
psbF
ath-u.5
for
psbF
gma-u.5
for
psbF
vvi-u.5
for
psbF
ppo-u.5
for
psbF
sly-u.5
for
psbF
nta-r.1
for
psbF
bdi-r.1
for
psbF


Ortholog ID: 12280
Species cit ath gma vvi ppo sly nta bdi
Symbol psbF psbF psbF psbF psbF psbF psbF psbF
Function* photosystem II protein VI photosystem II protein VI photosystem II reaction center subunit VI photosystem II reaction center subunit VI photosystem II protein VI photosystem II cytochrome b559 beta subunit photosystem II reaction center subunit VI photosystem II protein VI
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00190 Oxidative phosphorylation 6
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo03010 Ribosome 6
ppo00190 Oxidative phosphorylation 4
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 6
sly00190 Oxidative phosphorylation 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00190 Oxidative phosphorylation 4
nta03010 Ribosome 3
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 13
bdi00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4271221 844746 3989312 4025053 4929686 3950450 800446 6439878
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