ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4327852	AMSH-like ubiquitin thioesterase 2
osa-r.6	4327852	AMSH-like ubiquitin thioesterase 2
osa-m.8	4327852	AMSH-like ubiquitin thioesterase 2
osa-e.1	4327852	AMSH-like ubiquitin thioesterase 2
zma-u.5	100191225	AMSH-like ubiquitin thioesterase 2
ath-u.5	AMSH2	associated molecule with the SH3 domain of STAM 2
gma-u.5	100807282	AMSH-like ubiquitin thioesterase 2
vvi-u.5	100852697	AMSH-like ubiquitin thioesterase 2
ppo-u.5	7492397	AMSH-like ubiquitin thioesterase 2
mtr-u.5	11406347	AMSH-like ubiquitin thioesterase 2

functional annotation

KEGG

osa04144 [list] [network] Endocytosis (155 genes)

GO BP

GO:0070536 [list] [network] protein K63-linked deubiquitination

(4 genes)

IEA

GO CC

GO:0005768 [list] [network] endosome	(174 genes)	IEA
GO:0016020 [list] [network] membrane	(3446 genes)	IEA

GO MF

GO:0061578 [list] [network] K63-linked deubiquitinase activity	(3 genes)	IEA
GO:0140492 [list] [network] metal-dependent deubiquitinase activity	(3 genes)	IEA
GO:0005515 [list] [network] protein binding	(4590 genes)	IEA

Protein

XP_015621203.1 [sequence] [blastp]
XP_015621206.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, pero 1, chlo_mito 1, golg_plas 1, cyto_E.R. 1	(predict for XP_015621203.1)
nucl 4, chlo 2, cyto 2, cysk_nucl 2, nucl_plas 2	(predict for XP_015621206.1)

Subcellular
localization
TargetP

other 8, mito 3	(predict for XP_015621203.1)
other 9	(predict for XP_015621206.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4327852	osa-r.6 for 4327852	osa-m.8 for 4327852	osa-e.1 for 4327852	zma-u.5 for 100191225	ath-u.5 for AMSH2	gma-u.5 for 100807282	vvi-u.5 for 100852697	ppo-u.5 for 7492397	mtr-u.5 for 11406347

Ortholog ID: 10445

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

AMSH2

Function^*

AMSH-like ubiquitin thioesterase 2

associated molecule with the SH3 domain of STAM 2

AMSH-like ubiquitin thioesterase 2

AMSH-like ubiquitin thioesterase 3

AMSH-like ubiquitin thioesterase 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04075	Plant hormone signal transduction	3
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3
bdi00020	Citrate cycle (TCA cycle)	2
bdi01200	Carbon metabolism	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	4
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00561	Glycerolipid metabolism	3
mtr01240	Biosynthesis of cofactors	3
mtr00280	Valine, leucine and isoleucine degradation	2
mtr00310	Lysine degradation	2
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	3
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	5
bna03018	RNA degradation	4
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	8
cre03272	Virion - Hepatitis viruses	4
cre03250	Viral life cycle - HIV-1	3

Expression

Expression pattern

Entrez Gene ID^*

4327852

123078721

123070276

123444022

100844070

100191225

110433847

837603

100807282

103871842

100852697

7492397

11406347

107909669

107886586

106357924

125575362

102579319

102615340

107813862

5715257

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4327852 (osa-u.5 coexpression data)

Top 50 enrichment test to 4327852 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	sly	ghi	sot	nta	cre	tae
Paralog	4	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4327852 (osa-u.5 coexpression data)

Top 50 enrichment test to 4327852 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**