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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4329349   riboflavin biosynthesis protein PYRR, chloroplastic 
 osa-r.6   4329349   riboflavin biosynthesis protein PYRR, chloroplastic 
 osa-m.8   4329349   riboflavin biosynthesis protein PYRR, chloroplastic 
 osa-e.1   4329349   riboflavin biosynthesis protein PYRR, chloroplastic 
 ath-u.5   PHS1   cytidine/deoxycytidylate deaminase family protein 
 gma-u.5   100812653   riboflavin biosynthesis protein PYRR, chloroplastic 
 gma-u.5   100801283   riboflavin biosynthesis protein PYRR, chloroplastic 
 sly-u.5   101248871   riboflavin biosynthesis protein PYRR, chloroplastic 
 vvi-u.5   100264997   riboflavin biosynthesis protein PYRR, chloroplastic 
 ppo-u.5   7459224   riboflavin biosynthesis protein PYRR, chloroplastic 
 mtr-u.5   25498913   riboflavin biosynthesis protein PYRR, chloroplastic 

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Top 50 coexpressed genes to 4329349 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4329349 (osa-u.5 coexpression data)

CoexMap"4329349"


osaLOC4329349 | Entrez gene ID : 4329349      
Species osa ath gma sly vvi ppo mtr tae hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00740 [list] [network] Riboflavin metabolism (19 genes)
osa01240 [list] [network] Biosynthesis of cofactors (253 genes)
GO BP
GO:0009231 [list] [network] riboflavin biosynthetic process  (12 genes)  IEA  
GO CC
GO MF
GO:0008703 [list] [network] 5-amino-6-(5-phosphoribosylamino)uracil reductase activity  (1 genes)  IEA  
GO:0008835 [list] [network] diaminohydroxyphosphoribosylaminopyrimidine deaminase activity  (3 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (63 genes)  IEA  
Protein XP_015622579.1 [sequence] [blastp]
XP_015622580.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015622579.1)
mito 6,  chlo 4  (predict for XP_015622580.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015622579.1)
chlo 8,  mito 4  (predict for XP_015622580.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4329349

.
osa-r.6
for
4329349

.
osa-m.8
for
4329349

.
osa-e.1
for
4329349

.
ath-u.5
for
PHS1

.
gma-u.5
for
100812653

.
gma-u.5
for
100801283

.
sly-u.5
for
101248871

.
vvi-u.5
for
100264997

.
ppo-u.5
for
7459224

.
mtr-u.5
for
25498913

.


Ortholog ID: 10810
Species ath gma gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PHS1 LOC100801283 LOC100812653 LOC101248871 LOC4329349 LOC103873252 LOC100264997 LOC7459224 LOC25498913 LOC123139880 LOC123129003 LOC123405875 LOC107928372 LOC107909100 LOC106371360 LOC106435278 CHLRE_17g728950v5 LOC8056667 LOC102578655 LOC102625459 LOC100843272 LOC107780073 LOC107825400
Function* cytidine/deoxycytidylate deaminase family protein riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic-like uncharacterized protein riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic riboflavin biosynthesis protein PYRR, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03060 Protein export 3
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
bra00020 Citrate cycle (TCA cycle) 2
bra00620 Pyruvate metabolism 2
bra00785 Lipoic acid metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 3
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00860 Porphyrin metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03010 Ribosome 3
tae00740 Riboflavin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00860 Porphyrin metabolism 3
tae00740 Riboflavin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna00740 Riboflavin metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00740 Riboflavin metabolism 2
cre01240 Biosynthesis of cofactors 2
cre00260 Glycine, serine and threonine metabolism 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823893 100801283 100812653 101248871 4329349 103873252 100264997 7459224 25498913 123139880 123129003 123405875 107928372 107909100 106371360 106435278 5722836 8056667 102578655 102625459 100843272 107780073 107825400
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