ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4330747	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
osa-r.6	4330747	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
osa-m.8	4330747	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
osa-e.1	4330747	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
zma-u.5	100191671	uncharacterized LOC100191671
ath-u.5	AT1G22170	Phosphoglycerate mutase family protein
ath-u.5	PGM	phosphoglycerate/bisphosphoglycerate mutase
gma-u.5	100804183	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
gma-u.5	100802621	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
sly-u.5	101265817	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
sly-u.5	101247124	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
vvi-u.5	100245371	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
ppo-u.5	7463204	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
ppo-u.5	7477096	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
ppo-u.5	7468907	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
mtr-u.5	11442350	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1
mtr-u.5	25489422	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1

Top 50 coexpressed genes to 4330747 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4330747 (osa-u.5 coexpression data)

CoexMap"4330747"

[Cytoscape]

Annotation

functional annotation

KEGG

osa00010 [list] [network] Glycolysis / Gluconeogenesis (144 genes)

osa00260 [list] [network] Glycine, serine and threonine metabolism (66 genes)

osa01200 [list] [network] Carbon metabolism (276 genes)

osa01230 [list] [network] Biosynthesis of amino acids (235 genes)

GO BP

GO:0006096 [list] [network] glycolytic process

(61 genes)

IEA

GO CC

GO MF

GO:0016868 [list] [network] intramolecular phosphotransferase activity

(7 genes)

IEA

Protein

XP_015623414.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1

(predict for XP_015623414.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_015623414.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4330747	osa-r.6 for 4330747	osa-m.8 for 4330747	osa-e.1 for 4330747	zma-u.5 for 100191671	ath-u.5 for AT1G22170	ath-u.5 for PGM	gma-u.5 for 100804183	gma-u.5 for 100802621	sly-u.5 for 101265817	sly-u.5 for 101247124	vvi-u.5 for 100245371	ppo-u.5 for 7463204	ppo-u.5 for 7477096	ppo-u.5 for 7468907	mtr-u.5 for 11442350	mtr-u.5 for 25489422

Ortholog

Ortholog ID: 3165

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

PGM

Function^*

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

uncharacterized LOC100191671

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like

phosphoglycerate/bisphosphoglycerate mutase

Phosphoglycerate mutase family protein

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2-like

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	4
osa01200	Carbon metabolism	4
osa01230	Biosynthesis of amino acids	4
osa04141	Protein processing in endoplasmic reticulum	2
osa00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6
tae00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	11
tae00010	Glycolysis / Gluconeogenesis	10
tae01230	Biosynthesis of amino acids	6
tae00020	Citrate cycle (TCA cycle)	4
tae00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00360	Phenylalanine metabolism	5
hvu00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	7
hvu00020	Citrate cycle (TCA cycle)	5
hvu01210	2-Oxocarboxylic acid metabolism	4
hvu01230	Biosynthesis of amino acids	4
hvu00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	4
bdi00010	Glycolysis / Gluconeogenesis	3
bdi01230	Biosynthesis of amino acids	3
bdi00260	Glycine, serine and threonine metabolism	2
bdi00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	9
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
zma01200	Carbon metabolism	5
zma00620	Pyruvate metabolism	3
zma00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	7
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
sbi04144	Endocytosis	3
sbi01200	Carbon metabolism	2
sbi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	7
ath00030	Pentose phosphate pathway	5
ath00480	Glutathione metabolism	4
ath00195	Photosynthesis	3
ath01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00061	Fatty acid biosynthesis	10
ath01212	Fatty acid metabolism	9
ath01240	Biosynthesis of cofactors	8
ath01200	Carbon metabolism	7
ath00780	Biotin metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	5
gma01040	Biosynthesis of unsaturated fatty acids	5
gma01212	Fatty acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	12
gma01200	Carbon metabolism	11
gma00010	Glycolysis / Gluconeogenesis	7
gma00710	Carbon fixation by Calvin cycle	5
gma00030	Pentose phosphate pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	6
sly01230	Biosynthesis of amino acids	6
sly00900	Terpenoid backbone biosynthesis	5
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sly00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	2
sly00561	Glycerolipid metabolism	2
sly00564	Glycerophospholipid metabolism	2
sly04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	6
bra00910	Nitrogen metabolism	4
bra01310	Nitrogen cycle	4
bra00010	Glycolysis / Gluconeogenesis	3
bra01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	8
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
vvi00940	Phenylpropanoid biosynthesis	2
vvi01200	Carbon metabolism	2
vvi00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	13
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	10
ppo00010	Glycolysis / Gluconeogenesis	4
ppo00350	Tyrosine metabolism	3
ppo00360	Phenylalanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr00195	Photosynthesis	3
mtr01240	Biosynthesis of cofactors	3
mtr01230	Biosynthesis of amino acids	2
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	6
ghi01230	Biosynthesis of amino acids	6
ghi00280	Valine, leucine and isoleucine degradation	4
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00260	Glycine, serine and threonine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	6
ghi01230	Biosynthesis of amino acids	6
ghi00280	Valine, leucine and isoleucine degradation	4
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00260	Glycine, serine and threonine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00260	Glycine, serine and threonine metabolism	4
bna01200	Carbon metabolism	4
bna01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00260	Glycine, serine and threonine metabolism	4
bna01200	Carbon metabolism	4
bna01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	5
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sot00010	Glycolysis / Gluconeogenesis	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	5
sot01230	Biosynthesis of amino acids	5
sot01200	Carbon metabolism	3
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04146	Peroxisome	3
cit01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	3
nta00260	Glycine, serine and threonine metabolism	3
nta01200	Carbon metabolism	3
nta01230	Biosynthesis of amino acids	3
nta04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	3
nta00260	Glycine, serine and threonine metabolism	3
nta01200	Carbon metabolism	3
nta01230	Biosynthesis of amino acids	3
nta04070	Phosphatidylinositol signaling system	3

Expression

Expression pattern

Entrez Gene ID^*

4330747

123157798

123130957

123407892

123405001

100827073

100191671

110434942

844140

838822

100784422

100802621

101247124

101265817

103853105

100245371

7463204

7477096

25489422

11442350

107905043

107962433

106370078

106400108

102581345

102578340

102616660

102612693

142166279

107814760

The preparation time of this page was 0.2 [sec].


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	2	2	2	1	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4330747 (osa-u.5 coexpression data)

Top 50 enrichment test to 4330747 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**