ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4332456	protein IN2-1 homolog A
osa-r.6	4332456	protein IN2-1 homolog A
osa-m.8	4332456	protein IN2-1 homolog A
osa-u.5	4332455	protein IN2-1 homolog B-like
zma-u.5	542388	safener induced 1
zma-u.5	100282090	IN2-1 protein
zma-u.5	100282747	uncharacterized LOC100282747
ath-u.5	GSTL3	Glutathione S-transferase family protein
ath-u.5	GSTL1	glutathione transferase lambda 1
gma-u.5	100775492	glutathione S-transferase L3-like
gma-u.5	100793025	glutathione S-transferase L3
gma-u.5	GSTL3	glutathione S-transferase L3
sly-u.5	101256964	protein IN2-1 homolog B
vvi-u.5	100853342	glutathione S-transferase L3
vvi-u.5	100267329	glutathione S-transferase L3
vvi-u.5	100246597	glutathione S-transferase L3
ppo-u.5	7467597	glutathione S-transferase L3
ppo-u.5	18100253	glutathione S-transferase L3
mtr-u.5	11438242	glutathione S-transferase L3
mtr-u.5	11432355	glutathione S-transferase L3
mtr-u.5	25484065	glutathione S-transferase L3

Top 50 coexpressed genes to 4332456 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4332456 (osa-u.5 coexpression data)

CoexMap"4332456"

[Cytoscape]

Annotation

functional annotation

KEGG

osa00480 [list] [network] Glutathione metabolism (114 genes)

GO BP

GO:0010731 [list] [network] protein glutathionylation

(4 genes)

IEA

GO CC

GO MF

GO:0004364 [list] [network] glutathione transferase activity

(75 genes)

IEA

Protein

NP_001404432.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, mito 1, plas 1, pero 1, cysk_nucl 1, mito_plas 1

(predict for NP_001404432.1)

Subcellular
localization
TargetP

other 3

(predict for NP_001404432.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4332456	osa-r.6 for 4332456	osa-m.8 for 4332456	osa-u.5 for 4332455	zma-u.5 for 542388	zma-u.5 for 100282090	zma-u.5 for 100282747	ath-u.5 for GSTL3	ath-u.5 for GSTL1	gma-u.5 for 100775492	gma-u.5 for 100793025	gma-u.5 for GSTL3	sly-u.5 for 101256964	vvi-u.5 for 100853342	vvi-u.5 for 100267329	vvi-u.5 for 100246597	ppo-u.5 for 7467597	ppo-u.5 for 18100253	mtr-u.5 for 11438242	mtr-u.5 for 11432355	mtr-u.5 for 25484065

Ortholog

Ortholog ID: 1719

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

GSTL3

GSTL1

GSTL3

GSTL1

Function^*

protein IN2-1 homolog B-like

protein IN2-1 homolog A

protein IN2-1 homolog B

uncharacterized LOC112269838

protein IN2-1 homolog B

uncharacterized LOC100282747

safener induced 1

protein IN2-1

protein IN2-1 homolog B-like

Glutathione S-transferase family protein

glutathione transferase lambda 1

glutathione S-transferase L3

glutathione S-transferase

protein IN2-1 homolog B

glutathione S-transferase L1

glutathione S-transferase L3

glutathione S-transferase L3-like

glutathione S-transferase L1

glutathione S-transferase L3

glutathione S-transferase L1-like

glutathione S-transferase L3-like

glutathione S-transferase L2, chloroplastic-like

glutathione S-transferase L3-like

glutathione S-transferase L1-like

glutathione S-transferase L3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	4
osa00480	Glutathione metabolism	3
osa01240	Biosynthesis of cofactors	3
osa01200	Carbon metabolism	3
osa00920	Sulfur metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00710	Carbon fixation by Calvin cycle	2
osa01200	Carbon metabolism	2
osa00480	Glutathione metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	3
tae00900	Terpenoid backbone biosynthesis	3
tae00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00920	Sulfur metabolism	5
tae01320	Sulfur cycle	5
tae00480	Glutathione metabolism	4
tae00230	Purine metabolism	2
tae00261	Monobactam biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2
bdi00270	Cysteine and methionine metabolism	2
bdi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	7
zma00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	3
sbi00053	Ascorbate and aldarate metabolism	2
sbi00480	Glutathione metabolism	2
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	4
gma00620	Pyruvate metabolism	2
gma00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4
sly00710	Carbon fixation by Calvin cycle	3
sly01200	Carbon metabolism	3
sly00620	Pyruvate metabolism	2
sly00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00592	alpha-Linolenic acid metabolism	4
vvi01200	Carbon metabolism	2
vvi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	5
ppo01320	Sulfur cycle	4
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	4
ppo01320	Sulfur cycle	4
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00592	alpha-Linolenic acid metabolism	6
mtr00480	Glutathione metabolism	5
mtr00270	Cysteine and methionine metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00902	Monoterpenoid biosynthesis	2
ghi00330	Arginine and proline metabolism	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00902	Monoterpenoid biosynthesis	2
ghi00330	Arginine and proline metabolism	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4
bna00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4
bna00480	Glutathione metabolism	3
bna03082	ATP-dependent chromatin remodeling	2
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	4
sot00030	Pentose phosphate pathway	3
sot00190	Oxidative phosphorylation	3
sot00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00480	Glutathione metabolism	7
sot00592	alpha-Linolenic acid metabolism	3
sot01230	Biosynthesis of amino acids	2
sot00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	4
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta00480	Glutathione metabolism	2
nta00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	16
nta00480	Glutathione metabolism	2
nta00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4332455

4332456

123092521

123092522

123448966

112269838

100843419

100282747

542388

8084895

110431693

831798

831800

547597

100816962

101256964

103850458

103850459

100267329

100246597

18100253

7467597

25484065

11438242

107889730

107891011

111213691

111213692

102604161

102603659

102629666

102611781

107763456

107763767

The preparation time of this page was 0.1 [sec].


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	2	3	1	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4332456 (osa-u.5 coexpression data)

Top 50 enrichment test to 4332456 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**