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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4332656   YTH domain-containing protein ECT4 
 osa-r.6   4332656   YTH domain-containing protein ECT4 
 osa-m.8   4332656   YTH domain-containing protein ECT4 
 osa-e.1   4332656   YTH domain-containing protein ECT4 
 ath-u.5   ECT6   evolutionarily conserved C-terminal region 6 
 ath-u.5   ECT7   evolutionarily conserved C-terminal region 7 
 gma-u.5   100818167   YTH domain-containing protein ECT4 
 gma-u.5   100784464   YTH domain-containing protein ECT4 
 gma-u.5   100777489   YTH domain-containing protein ECT4 
 sly-u.5   101245931   YTH domain-containing protein ECT4 
 vvi-u.5   100854837   YTH domain-containing protein ECT4 
 ppo-u.5   7498232   YTH domain-containing protein ECT4 
 ppo-u.5   7468129   YTH domain-containing protein ECT4 
 mtr-u.5   11420003   YTH domain-containing protein ECT4 
 mtr-u.5   11411723   YTH domain-containing protein ECT4 

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Top 50 coexpressed genes to 4332656 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4332656 (osa-u.5 coexpression data)

CoexMap"4332656"


osaLOC4332656 | Entrez gene ID : 4332656      
Species osa ath gma sly vvi ppo mtr tae hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 4 2 3 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061157 [list] [network] mRNA destabilization  (32 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (333 genes)  IEA  
Protein XP_015632074.1 [sequence] [blastp]
XP_015632076.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_015632074.1)
nucl 9,  chlo 1,  pero 1  (predict for XP_015632076.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_015632074.1)
other 6,  mito 3  (predict for XP_015632076.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4332656

.
osa-r.6
for
4332656

.
osa-m.8
for
4332656

.
osa-e.1
for
4332656

.
ath-u.5
for
ECT6

.
ath-u.5
for
ECT7

.
gma-u.5
for
100818167

.
gma-u.5
for
100784464

.
gma-u.5
for
100777489

.
sly-u.5
for
101245931

.
vvi-u.5
for
100854837

.
ppo-u.5
for
7498232

.
ppo-u.5
for
7468129

.
mtr-u.5
for
11420003

.
mtr-u.5
for
11411723

.


Ortholog ID: 7572
Species ath ath gma gma sly osa bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sot cit bdi nta nta
Symbol ECT6 ECT7 LOC100777489 LOC100784464 LOC101245931 LOC4332656 LOC103871495 LOC100854837 LOC7468129 LOC7498232 LOC11411723 LOC11420003 LOC123097639 LOC123092302 LOC123448786 LOC107936122 LOC107910541 LOC106406172 LOC106346402 LOC102589124 LOC102624076 LOC100822058 LOC107808296 LOC107813705
Function* evolutionarily conserved C-terminal region 6 evolutionarily conserved C-terminal region 7 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4-like uncharacterized LOC102589124 YTH domain-containing protein ECT4-like uncharacterized LOC100822058 YTH domain-containing protein ECT4-like uncharacterized LOC107813705
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04144 Endocytosis 2
vvi03018 RNA degradation 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820996 841229 100777489 100784464 101245931 4332656 103871495 100854837 7468129 7498232 11411723 11420003 123097639 123092302 123448786 107936122 107910541 106406172 106346402 102589124 102624076 100822058 107808296 107813705
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