ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4333727	protein SABRE
osa-r.6	4333727	protein SABRE
osa-m.8	4333727	protein SABRE
osa-e.1	4333727	protein SABRE
osa-u.5	4332858	protein ABERRANT POLLEN TRANSMISSION 1
tae-r.2	123095685	protein SABRE
tae-r.2	123087282	protein SABRE
tae-r.2	123090670	protein SABRE
hvu-r.1	123447128	protein SABRE
hvu-r.1	123448441	protein ABERRANT POLLEN TRANSMISSION 1-like
bdi-r.1	100834533	protein ABERRANT POLLEN TRANSMISSION 1
bdi-r.1	100829043	protein SABRE
zma-u.5	100274014	uncharacterized LOC100274014
zma-u.5	100126430	aberrant pollen transmission 1
sbi-r.1	8056717	protein SABRE
sbi-r.1	8082285	protein ABERRANT POLLEN TRANSMISSION 1
ath-u.5	AT5G49680	SABRE-like protein
ath-u.5	SAB	HYPERSENSITIVE TO PI STARVATION 4
gma-u.5	106798385	protein SABRE
gma-u.5	100802230	protein SABRE
gma-u.5	100785854	protein SABRE
sly-u.5	101260131	protein SABRE
sly-u.5	101252761	protein SABRE-like
bra-r.6	103828875	protein SABRE
bra-r.6	103864361	protein KINKY POLLEN
vvi-u.5	100254031	protein SABRE
ppo-u.5	7467224	protein SABRE
mtr-u.5	11427419	protein SABRE
mtr-u.5	11429828	protein SABRE
ghi-r.1	107957536	protein SABRE
ghi-r.1	107905146	protein SABRE
ghi-r.1	107900617	protein SABRE
bna-r.1	106429397	protein KINKY POLLEN
bna-r.1	106449195	protein SABRE-like
bna-r.1	106447360	protein SABRE
sot-r.1	102599089	protein SABRE
sot-r.1	102586371	protein SABRE-like
cit-r.1	102612548	protein SABRE
nta-r.1	107806432	protein SABRE
nta-r.1	107796518	protein SABRE-like
nta-r.1	107783344	protein SABRE-like
cre-r.1	CHLRE_17g746047v5	uncharacterized protein
cre-r.1	CHLRE_14g608050v5	uncharacterized protein

Top 50 coexpressed genes to 4333727 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4333727 (osa-u.5 coexpression data)

CoexMap"4333727"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015630633.1 [sequence] [blastp]
XP_015630636.2 [sequence] [blastp]
XP_015630637.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, mito 1	(predict for XP_015630633.1)
nucl 4, cyto 4, chlo 2, cysk_nucl 2, nucl_plas 2	(predict for XP_015630636.2)
nucl 8, cyto 2	(predict for XP_015630637.1)

Subcellular
localization
TargetP

scret 8	(predict for XP_015630633.1)
scret 7	(predict for XP_015630636.2)
other 9	(predict for XP_015630637.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4333727	osa-r.6 for 4333727	osa-m.8 for 4333727	osa-e.1 for 4333727	osa-u.5 for 4332858	tae-r.2 for 123095685	tae-r.2 for 123087282	tae-r.2 for 123090670	hvu-r.1 for 123447128	hvu-r.1 for 123448441	bdi-r.1 for 100834533	bdi-r.1 for 100829043	zma-u.5 for 100274014	zma-u.5 for 100126430	sbi-r.1 for 8056717	sbi-r.1 for 8082285	ath-u.5 for AT5G49680	ath-u.5 for SAB	gma-u.5 for 106798385	gma-u.5 for 100802230	gma-u.5 for 100785854	sly-u.5 for 101260131	sly-u.5 for 101252761	bra-r.6 for 103828875	bra-r.6 for 103864361	vvi-u.5 for 100254031	ppo-u.5 for 7467224	mtr-u.5 for 11427419	mtr-u.5 for 11429828	ghi-r.1 for 107957536	ghi-r.1 for 107905146	ghi-r.1 for 107900617	bna-r.1 for 106429397	bna-r.1 for 106449195	bna-r.1 for 106447360	sot-r.1 for 102599089	sot-r.1 for 102586371	cit-r.1 for 102612548	nta-r.1 for 107806432	nta-r.1 for 107796518	nta-r.1 for 107783344	cre-r.1 for CHLRE_17g746047v5	cre-r.1 for CHLRE_14g608050v5

Ortholog

Ortholog ID: 3047

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SAB

Function^*

protein SABRE

protein ABERRANT POLLEN TRANSMISSION 1

protein SABRE

protein ABERRANT POLLEN TRANSMISSION 1

protein SABRE

protein ABERRANT POLLEN TRANSMISSION 1-like

protein ABERRANT POLLEN TRANSMISSION 1

protein SABRE

uncharacterized LOC100274014

aberrant pollen transmission 1

protein SABRE

protein ABERRANT POLLEN TRANSMISSION 1

SABRE-like protein

HYPERSENSITIVE TO PI STARVATION 4

protein SABRE

protein SABRE-like

protein SABRE

protein KINKY POLLEN

protein SABRE

protein SABRE-like

protein SABRE

protein SABRE-like

protein SABRE

protein SABRE-like

protein SABRE

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2
hvu04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	7
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	5
gma00053	Ascorbate and aldarate metabolism	2
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	4
bra00220	Arginine biosynthesis	3
bra00250	Alanine, aspartate and glutamate metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2
ghi03015	mRNA surveillance pathway	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	3
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	3
nta03018	RNA degradation	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	3
nta03018	RNA degradation	2
nta04814	Motor proteins	2
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

4333727

4332858

123095685

123085923

123097395

123447128

123448441

100834533

100829043

100274014

100126430

8056717

8082285

835031

842193

106798385

100802230

100777373

101260131

101252761

103828875

103864361

100254031

7467224

11427419

11429828

107957536

107905146

107957830

106449195

106447360

106371885

102599089

102586371

102612548

107796518

107783344

107822498

5729113

5726918

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	2	2	2	2	2	3	2	2	1	1	2	3	3	2	1	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4333727 (osa-u.5 coexpression data)

Top 50 enrichment test to 4333727 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**