ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4338593	ribosomal RNA-processing protein 14-C
osa-r.6	4338593	ribosomal RNA-processing protein 14-C
osa-e.1	4338593	ribosomal RNA-processing protein 14-C
zma-u.5	103627451	rRNA-processing protein 14
ath-u.5	AT5G05210	Surfeit locus protein 6
gma-u.5	100798662	surfeit locus protein 6
gma-u.5	100781353	ribosomal RNA-processing protein 14-C-like
sly-u.5	101246009	ribosomal RNA-processing protein 14-C
vvi-u.5	100263152	uncharacterized LOC100263152
ppo-u.5	7475431	uncharacterized LOC7475431
mtr-u.5	11436486	surfeit locus protein 6

functional annotation

KEGG

GO BP

GO:0042274 [list] [network] ribosomal small subunit biogenesis	(81 genes)	IEA
GO:0042273 [list] [network] ribosomal large subunit biogenesis	(85 genes)	IEA

GO CC

GO:0005730 [list] [network] nucleolus

(202 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(1223 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1843 genes)	IEA

Protein

XP_015637326.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_015637326.1)

Subcellular
localization
TargetP

other 7

(predict for XP_015637326.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4338593	osa-r.6 for 4338593	osa-e.1 for 4338593	zma-u.5 for 103627451	ath-u.5 for AT5G05210	gma-u.5 for 100798662	gma-u.5 for 100781353	sly-u.5 for 101246009	vvi-u.5 for 100263152	ppo-u.5 for 7475431	mtr-u.5 for 11436486

Ortholog ID: 7518

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

ribosomal RNA-processing protein 14-C

ribosomal RNA-processing protein 14

ribosomal RNA-processing protein 14-C

rRNA-processing protein 14

surfeit locus protein 6 homolog

Surfeit locus protein 6

ribosomal RNA-processing protein 14-C-like

surfeit locus protein 6

ribosomal RNA-processing protein 14-C

ribosomal RNA-processing protein 14

uncharacterized LOC100263152

uncharacterized LOC7475431

surfeit locus protein 6

surfeit locus protein 6 homolog

ribosomal RNA-processing protein 14

ribosomal RNA-processing protein 14-like

ribosomal RNA-processing protein 14

ribosomal RNA-processing protein 14-C-like

uncharacterized LOC102612211

uncharacterized LOC107821668

uncharacterized LOC107828845

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2
osa03008	Ribosome biogenesis in eukaryotes	2
osa03013	Nucleocytoplasmic transport	2
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo00220	Arginine biosynthesis	2
ppo00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3

Expression

Expression pattern

Entrez Gene ID^*

4338593

123137579

123127693

123401622

100820931

100825057

103627451

8074787

830403

100781353

100798662

101246009

103855622

103850575

100263152

7475431

11436486

107929135

107943112

106380847

106428021

102595193

102612211

107821668

107828845

5727325

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4338593 (osa-u.5 coexpression data)

Top 50 enrichment test to 4338593 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4338593 (osa-u.5 coexpression data)

Top 50 enrichment test to 4338593 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**