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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4339915   uncharacterized LOC4339915 
 osa-r.6   4339915   uncharacterized LOC4339915 
 osa-m.8   4339915   uncharacterized LOC4339915 
 osa-e.1   4339915   uncharacterized LOC4339915 
 tae-r.2   123165128   protein SMG9 
 tae-r.2   123172566   protein SMG9-like 
 tae-r.2   123088331   protein SMG9-like 
 hvu-r.1   123411514   protein SMG9-like 
 bdi-r.1   100840148   protein SMG9 
 zma-u.5   100276590   uncharacterized LOC100276590 
 sbi-r.1   8066908   protein SMG9 
 gma-u.5   100810369   protein SMG9 
 gma-u.5   100793317   protein SMG9 
 sly-u.5   101264474   uncharacterized LOC101264474 
 vvi-u.5   100245949   uncharacterized LOC100245949 
 ppo-u.5   18104198   uncharacterized LOC18104198 
 mtr-u.5   11433720   protein SMG9 
 ghi-r.1   107931355   protein SMG9 
 ghi-r.1   107888496   protein SMG9 
 sot-r.1   102580789   protein SMG9-like 
 cit-r.1   102611390   uncharacterized LOC102611390 
 nta-r.1   107805827   uncharacterized LOC107805827 
 nta-r.1   107796913   uncharacterized LOC107796913 

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Top 50 coexpressed genes to 4339915 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4339915 (osa-u.5 coexpression data)

CoexMap"4339915"


osaLOC4339915 | Entrez gene ID : 4339915      
Species osa tae hvu bdi zma sbi gma sly vvi ppo mtr ghi sot cit nta bna cre bra ath
Paralog 4 3 1 1 1 1 2 1 1 1 1 2 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (11 genes)  IEA  
GO CC
GO MF
Protein XP_015643904.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_015643904.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015643904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4339915
osa-r.6
for
4339915
osa-m.8
for
4339915
osa-e.1
for
4339915
tae-r.2
for
123165128
tae-r.2
for
123172566
tae-r.2
for
123088331
hvu-r.1
for
123411514
bdi-r.1
for
100840148
zma-u.5
for
100276590
sbi-r.1
for
8066908
gma-u.5
for
100810369
gma-u.5
for
100793317
sly-u.5
for
101264474
vvi-u.5
for
100245949
ppo-u.5
for
18104198
mtr-u.5
for
11433720
ghi-r.1
for
107931355
ghi-r.1
for
107888496
sot-r.1
for
102580789
cit-r.1
for
102611390
nta-r.1
for
107805827
nta-r.1
for
107796913


Ortholog ID: 11867
Species osa tae tae tae hvu bdi zma sbi gma gma sly vvi ppo mtr ghi ghi sot cit nta nta
Symbol LOC4339915 LOC123165128 LOC123088331 LOC123150117 LOC123411514 LOC100840148 LOC100276590 LOC8066908 LOC100810369 LOC100793317 LOC101264474 LOC100245949 LOC18104198 LOC11433720 LOC107931355 LOC107888496 LOC102580789 LOC102611390 LOC107805827 LOC107796913
Function* uncharacterized LOC4339915 protein SMG9 protein SMG9-like protein SMG9 protein SMG9-like protein SMG9 uncharacterized LOC100276590 protein SMG9 protein SMG9 protein SMG9 uncharacterized LOC101264474 uncharacterized LOC100245949 uncharacterized LOC18104198 protein SMG9 protein SMG9 protein SMG9 protein SMG9-like uncharacterized LOC102611390 uncharacterized LOC107805827 uncharacterized LOC107796913
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03022 Basal transcription factors 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
nta00640 Propanoate metabolism 2
nta01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4339915 123165128 123088331 123150117 123411514 100840148 100276590 8066908 100810369 100793317 101264474 100245949 18104198 11433720 107931355 107888496 102580789 102611390 107805827 107796913
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