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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4340655   tRNA threonylcarbamoyladenosine dehydratase 
 osa-r.6   4340655   tRNA threonylcarbamoyladenosine dehydratase 
 osa-m.8   4340655   tRNA threonylcarbamoyladenosine dehydratase 
 osa-e.1   4340655   tRNA threonylcarbamoyladenosine dehydratase 
 zma-u.5   100284561   mitochondrion protein 
 ath-u.5   AT5G37530   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100815445   tRNA threonylcarbamoyladenosine dehydratase 
 gma-u.5   100798982   tRNA threonylcarbamoyladenosine dehydratase 
 sly-u.5   101261624   tRNA threonylcarbamoyladenosine dehydratase 
 vvi-u.5   100263875   tRNA threonylcarbamoyladenosine dehydratase 
 ppo-u.5   7493577   tRNA threonylcarbamoyladenosine dehydratase 2 
 mtr-u.5   11428715   tRNA threonylcarbamoyladenosine dehydratase 2 

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Top 50 coexpressed genes to 4340655 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4340655 (osa-u.5 coexpression data)

CoexMap"4340655"


osaLOC4340655 | Entrez gene ID : 4340655    
Species osa zma ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061504 [list] [network] cyclic threonylcarbamoyladenosine biosynthetic process  (1 genes)  IEA  
GO CC
GO:0009536 [list] [network] plastid  (669 genes)  IEA  
GO MF
GO:0061503 [list] [network] tRNA threonylcarbamoyladenosine dehydratase  (1 genes)  IEA  
GO:0008641 [list] [network] ubiquitin-like modifier activating enzyme activity  (13 genes)  IEA  
Protein XP_015644265.1 [sequence] [blastp]
XP_015644266.1 [sequence] [blastp]
XP_025882012.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_015644265.1)
chlo 10  (predict for XP_015644266.1)
cysk 6,  cyto 4  (predict for XP_025882012.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_015644265.1)
mito 4  (predict for XP_015644266.1)
other 9  (predict for XP_025882012.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4340655
osa-r.6
for
4340655
osa-m.8
for
4340655
osa-e.1
for
4340655
zma-u.5
for
100284561
ath-u.5
for
AT5G37530
gma-u.5
for
100815445
gma-u.5
for
100798982
sly-u.5
for
101261624
vvi-u.5
for
100263875
ppo-u.5
for
7493577
mtr-u.5
for
11428715


Ortholog ID: 10967
Species osa tae tae hvu bdi zma sbi ath gma gma sly vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4340655 LOC123155514 LOC123149663 LOC123408425 LOC100844856 LOC100284561 LOC8061504 AT5G37530 LOC100798982 LOC100815445 LOC101261624 LOC100263875 LOC7493577 LOC11428715 LOC107895318 LOC107912884 LOC106410156 LOC106445020 LOC102595601 LOC102619567 LOC107825010 LOC107832280 CHLRE_03g159400v5
Function* tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase mitochondrion protein tRNA threonylcarbamoyladenosine dehydratase NAD(P)-binding Rossmann-fold superfamily protein tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase-like tRNA threonylcarbamoyladenosine dehydratase-like tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase-like tRNA threonylcarbamoyladenosine dehydratase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03010 Ribosome 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03030 DNA replication 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo04120 Ubiquitin mediated proteolysis 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4340655 123155514 123149663 123408425 100844856 100284561 8061504 833731 100798982 100815445 101261624 100263875 7493577 11428715 107895318 107912884 106410156 106445020 102595601 102619567 107825010 107832280 5723009
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